Strain Fitness in Shewanella loihica PV-4 around Shew_3111

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
3,691,093	+		Shew_3109	0.74	+0.2
3,691,101	-		Shew_3109	0.75	+0.1
3,691,267	-				-0.1
3,691,441	-				+0.0
3,691,480	+				+0.2
3,691,481	+				+1.0
3,691,481	+				+1.3
3,691,481	+				+0.7
3,691,481	+				+1.1
3,691,489	-				-1.1
3,691,489	-				+1.1
3,691,489	-				+0.3
3,691,512	+				-0.1
3,691,611	-				-0.2
3,691,627	+				+0.6
3,691,627	+				+0.3
3,691,627	+				+0.4
3,691,627	+				+0.5
3,691,635	-				+0.2
3,691,685	+		Shew_3110	0.12	+0.4
3,691,693	-		Shew_3110	0.16	+0.2
3,691,693	-		Shew_3110	0.16	+0.2
3,691,693	-		Shew_3110	0.16	+0.2
3,691,693	-		Shew_3110	0.16	+0.1
3,691,785	-		Shew_3110	0.60	+0.9
3,691,831	+		Shew_3110	0.82	+0.9
3,691,842	+		Shew_3110	0.87	-0.5
3,691,857	+				+0.3
3,691,872	+				-0.9
3,691,872	+				-0.1
3,691,872	+				+0.4
3,691,872	+				-0.5
3,691,880	-				-0.6
3,691,880	-				+1.2
3,691,943	-				-0.1
3,691,951	-				+0.4
3,692,039	-				+0.7
3,692,095	-		Shew_3111	0.14	+0.2
3,692,145	+		Shew_3111	0.20	+1.2
3,692,153	-		Shew_3111	0.21	-1.1
3,692,387	-		Shew_3111	0.50	-0.2
3,692,387	-		Shew_3111	0.50	-0.0
3,692,437	+		Shew_3111	0.56	-0.1
3,692,437	+		Shew_3111	0.56	+0.0
3,692,437	+		Shew_3111	0.56	-0.3
3,692,437	+		Shew_3111	0.56	-0.3
3,692,445	-		Shew_3111	0.57	+0.0
3,692,445	-		Shew_3111	0.57	+0.3
3,692,445	-		Shew_3111	0.57	+0.2
3,692,445	-		Shew_3111	0.57	-0.1
3,692,656	-		Shew_3111	0.82	-0.1
3,692,907	+				-0.8
3,692,952	+				+0.4
3,692,960	-				-0.1
3,693,060	+				+0.0
3,693,076	-				-0.1
3,693,077	-				+0.2
3,693,125	+				+0.0
3,693,311	+				-0.1
3,693,363	+				+0.1