Strain Fitness in Shewanella loihica PV-4 around Shew_3028

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
3,596,209	+		Shew_3027	0.42	+0.0
3,596,266	-		Shew_3027	0.61	+1.1
3,596,269	-		Shew_3027	0.62	-0.8
3,596,291	-		Shew_3027	0.70	+1.4
3,596,293	-		Shew_3027	0.70	-0.3
3,596,293	+		Shew_3027	0.70	+0.3
3,596,294	+		Shew_3027	0.71	-0.5
3,596,295	+		Shew_3027	0.71	+0.1
3,596,303	-		Shew_3027	0.74	+0.5
3,596,310	+		Shew_3027	0.76	+0.9
3,596,324	+		Shew_3027	0.81	+2.0
3,596,332	-		Shew_3027	0.83	+0.2
3,596,357	+				-0.2
3,596,358	+				+0.2
3,596,452	+				+0.6
3,596,463	+				+0.5
3,596,463	+				+0.2
3,596,471	-				-1.2
3,596,551	+				+1.2
3,596,551	+				+0.4
3,596,551	+				+0.3
3,596,551	+				+0.7
3,596,551	+				+0.3
3,596,559	-				-0.1
3,596,559	-				-0.1
3,596,679	+				+0.4
3,596,709	-				+0.1
3,596,715	-				-0.7
3,596,821	+				+0.1
3,596,821	+				+0.9
3,596,829	-				+0.8
3,596,829	-				-0.2
3,596,957	+				+0.9
3,596,957	+				-1.5
3,596,965	-				-0.1
3,596,965	-				-0.2
3,596,966	+				-0.0
3,596,975	-				+0.0
3,596,975	-				-0.1
3,596,975	-				+0.7
3,597,069	-				+0.4
3,597,069	-				-0.4
3,597,070	+				+0.3
3,597,070	-				-0.1
3,597,071	-				+0.4
3,597,071	-				+0.1
3,597,080	+				-0.9
3,597,089	-				+0.2
3,597,100	-				-0.3
3,597,102	+				+0.0
3,597,105	-				-0.1
3,597,125	-				+0.1
3,597,126	+				-0.1
3,597,126	-				+1.3
3,597,136	+				-1.0
3,597,136	+				+0.4
3,597,141	+				+0.1
3,597,162	+				-0.0
3,597,170	-				-0.1
3,597,170	-				-0.4
3,597,170	-				-0.2
3,597,251	-		Shew_3028	0.14	-0.2
3,597,264	+		Shew_3028	0.15	+0.3
3,597,264	+		Shew_3028	0.15	+0.3
3,597,264	+		Shew_3028	0.15	+0.0
3,597,264	+		Shew_3028	0.15	-0.1
3,597,272	-		Shew_3028	0.16	+0.4
3,597,272	-		Shew_3028	0.16	+0.9
3,597,324	+		Shew_3028	0.19	+0.3
3,597,552	+		Shew_3028	0.35	-0.1
3,597,552	+		Shew_3028	0.35	+0.5
3,597,555	-		Shew_3028	0.35	+1.2
3,597,618	+		Shew_3028	0.40	+1.0
3,597,651	-		Shew_3028	0.42	-0.7
3,597,651	-		Shew_3028	0.42	+0.2
3,597,729	+		Shew_3028	0.47	-0.1
3,597,754	-		Shew_3028	0.49	-0.0
3,597,869	+		Shew_3028	0.57	-0.1
3,597,951	-		Shew_3028	0.63	+0.1
3,598,357	-				-0.1
3,598,470	-				+0.0
3,598,501	-				+1.0
3,598,624	-		Shew_3029	0.15	+0.2
3,598,772	+		Shew_3029	0.46	-0.8
3,598,941	-		Shew_3029	0.82	+0.5
3,599,145	-				-0.6
3,599,312	-		Shew_3030	0.22	-0.1