Experiment: 2-Furfuraldehyde 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_2783 and Shew_2784 are separated by 511 nucleotides Shew_2784 and Shew_2785 are separated by 232 nucleotides Shew_2785 and Shew_2786 are separated by 100 nucleotides
Shew_2783: Shew_2783 - peptidase U32 (RefSeq), at 3,292,157 to 3,293,518
_2783
Shew_2784: Shew_2784 - phosphoesterase, PA-phosphatase related (RefSeq), at 3,294,030 to 3,295,358
_2784
Shew_2785: Shew_2785 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq), at 3,295,591 to 3,295,848
_2785
Shew_2786: Shew_2786 - sterol-binding domain-containing protein (RefSeq), at 3,295,949 to 3,296,461
_2786
Position (kb)
3294
3295
3296 Strain fitness (log2 ratio)
-1
0
1 at 3293.354 kb on - strand, within Shew_2783 at 3293.619 kb on + strand at 3294.067 kb on + strand at 3294.276 kb on + strand, within Shew_2784 at 3294.284 kb on - strand, within Shew_2784 at 3294.320 kb on + strand, within Shew_2784 at 3294.583 kb on + strand, within Shew_2784 at 3294.593 kb on + strand, within Shew_2784 at 3294.768 kb on + strand, within Shew_2784 at 3294.802 kb on + strand, within Shew_2784 at 3295.019 kb on + strand, within Shew_2784 at 3295.244 kb on + strand at 3295.254 kb on + strand at 3295.260 kb on + strand at 3295.720 kb on + strand, within Shew_2785 at 3295.912 kb on + strand at 3295.934 kb on + strand at 3296.232 kb on + strand, within Shew_2786 at 3296.310 kb on + strand, within Shew_2786
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.0625 vol% remove 3,293,354 - Shew_2783 0.88 +0.4 3,293,619 + +0.1 3,294,067 + +0.3 3,294,276 + Shew_2784 0.19 +0.2 3,294,284 - Shew_2784 0.19 +0.1 3,294,320 + Shew_2784 0.22 +0.2 3,294,583 + Shew_2784 0.42 +0.5 3,294,593 + Shew_2784 0.42 -0.1 3,294,768 + Shew_2784 0.56 -0.2 3,294,802 + Shew_2784 0.58 +0.9 3,295,019 + Shew_2784 0.74 +0.6 3,295,244 + +0.0 3,295,254 + -0.1 3,295,260 + +0.2 3,295,720 + Shew_2785 0.50 +0.1 3,295,912 + +0.1 3,295,934 + +0.0 3,296,232 + Shew_2786 0.55 +1.1 3,296,310 + Shew_2786 0.70 -0.3
Or see this region's nucleotide sequence