Experiment: 2-Furfuraldehyde 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_2571 and Shew_2572 are separated by 48 nucleotides Shew_2572 and Shew_2573 are separated by 57 nucleotides Shew_2573 and Shew_2574 are separated by 2 nucleotides Shew_2574 and Shew_2575 are separated by 46 nucleotides
Shew_2571: Shew_2571 - propionyl-CoA carboxylase (RefSeq), at 3,029,723 to 3,031,330
_2571
Shew_2572: Shew_2572 - enoyl-CoA hydratase/isomerase (RefSeq), at 3,031,379 to 3,032,179
_2572
Shew_2573: Shew_2573 - carbamoyl-phosphate synthase L chain, ATP-binding (RefSeq), at 3,032,237 to 3,034,270
_2573
Shew_2574: Shew_2574 - pyruvate carboxyltransferase (RefSeq), at 3,034,273 to 3,035,178
_2574
Shew_2575: Shew_2575 - 3-oxoacid CoA-transferase, A subunit (RefSeq), at 3,035,225 to 3,035,926
_2575
Position (kb)
3032
3033
3034
3035 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5 at 3031.249 kb on - strand at 3031.425 kb on - strand at 3031.542 kb on + strand, within Shew_2572 at 3031.857 kb on + strand, within Shew_2572 at 3032.292 kb on + strand at 3032.310 kb on - strand at 3032.310 kb on - strand at 3032.676 kb on - strand, within Shew_2573 at 3032.825 kb on + strand, within Shew_2573 at 3033.250 kb on + strand, within Shew_2573 at 3033.542 kb on + strand, within Shew_2573 at 3033.758 kb on - strand, within Shew_2573 at 3033.822 kb on + strand, within Shew_2573 at 3034.033 kb on + strand, within Shew_2573 at 3034.124 kb on + strand at 3034.609 kb on - strand, within Shew_2574 at 3035.162 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.0625 vol% remove 3,031,249 - +1.9 3,031,425 - +2.2 3,031,542 + Shew_2572 0.20 +4.6 3,031,857 + Shew_2572 0.60 +5.1 3,032,292 + +1.9 3,032,310 - +2.4 3,032,310 - +2.3 3,032,676 - Shew_2573 0.22 +1.9 3,032,825 + Shew_2573 0.29 +1.7 3,033,250 + Shew_2573 0.50 +2.0 3,033,542 + Shew_2573 0.64 +2.1 3,033,758 - Shew_2573 0.75 +2.2 3,033,822 + Shew_2573 0.78 +1.6 3,034,033 + Shew_2573 0.88 +2.1 3,034,124 + +2.2 3,034,609 - Shew_2574 0.37 +4.1 3,035,162 - +3.0
Or see this region's nucleotide sequence