Strain Fitness in Shewanella loihica PV-4 around Shew_2302
Experiment: 2-Furfuraldehyde 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.0625 vol% |
---|---|---|---|---|---|
remove | |||||
2,696,933 | - | Shew_2301 | 0.84 | -0.1 | |
2,696,976 | - | Shew_2301 | 0.86 | -0.0 | |
2,697,378 | - | -0.3 | |||
2,697,870 | + | Shew_2302 | 0.27 | +3.7 | |
2,697,989 | + | Shew_2302 | 0.35 | +3.7 | |
2,698,336 | + | Shew_2302 | 0.58 | +2.7 | |
2,698,375 | + | Shew_2302 | 0.61 | +3.5 | |
2,698,393 | - | Shew_2302 | 0.62 | +3.3 | |
2,699,667 | + | +0.4 | |||
2,699,675 | - | +1.0 | |||
2,699,731 | + | +1.3 | |||
2,699,746 | + | +0.5 | |||
2,699,820 | - | +0.1 |
Or see this region's nucleotide sequence