Strain Fitness in Shewanella loihica PV-4 around Shew_2258
Experiment: 2-Furfuraldehyde 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.0625 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 2,637,395 | + | Shew_2257 | 0.37 | -0.9 | |
| 2,637,749 | - | +0.3 | |||
| 2,637,761 | - | +0.4 | |||
| 2,637,761 | - | -0.1 | |||
| 2,637,778 | - | +0.1 | |||
| 2,637,845 | + | -0.0 | |||
| 2,637,853 | - | -0.1 | |||
| 2,638,223 | + | Shew_2258 | 0.64 | -0.7 | |
| 2,638,787 | + | Shew_2259 | 0.18 | +0.2 | |
| 2,638,883 | - | Shew_2259 | 0.26 | -0.2 | |
| 2,639,353 | - | Shew_2259 | 0.65 | +0.5 |
Or see this region's nucleotide sequence