Strain Fitness in Shewanella loihica PV-4 around Shew_1814
Experiment: 2-Furfuraldehyde 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.0625 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 2,084,521 | + | Shew_1812 | 0.70 | +0.2 | |
| 2,084,588 | + | Shew_1812 | 0.73 | +0.1 | |
| 2,084,730 | + | Shew_1812 | 0.79 | +2.3 | |
| 2,084,740 | + | Shew_1812 | 0.80 | -1.0 | |
| 2,084,776 | - | Shew_1812 | 0.82 | +0.3 | |
| 2,084,824 | - | Shew_1812 | 0.84 | +0.6 | |
| 2,084,892 | - | Shew_1812 | 0.87 | +0.4 | |
| 2,085,680 | - | Shew_1814 | 0.15 | -0.0 | |
| 2,086,158 | + | Shew_1814 | 0.39 | +1.8 | |
| 2,086,158 | + | Shew_1814 | 0.39 | +0.0 |
Or see this region's nucleotide sequence