Strain Fitness in Shewanella loihica PV-4 around Shew_1474
Experiment: 2-Furfuraldehyde 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.0625 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 1,699,065 | - | Shew_1473 | 0.25 | +0.5 | |
| 1,699,072 | - | Shew_1473 | 0.26 | -0.0 | |
| 1,699,133 | + | Shew_1473 | 0.32 | +0.5 | |
| 1,699,143 | + | Shew_1473 | 0.34 | +1.1 | |
| 1,699,150 | + | Shew_1473 | 0.34 | +0.2 | |
| 1,699,197 | - | Shew_1473 | 0.40 | -0.4 | |
| 1,699,502 | - | Shew_1473 | 0.74 | +0.5 | |
| 1,699,778 | - | -0.9 | |||
| 1,700,148 | + | Shew_1474 | 0.41 | -0.3 | |
| 1,700,173 | - | Shew_1474 | 0.44 | -1.6 | |
| 1,700,825 | + | +0.0 | |||
| 1,701,098 | - | Shew_1475 | 0.20 | +0.4 | |
| 1,701,248 | + | Shew_1475 | 0.42 | -1.1 | |
| 1,701,413 | + | Shew_1475 | 0.66 | -0.1 |
Or see this region's nucleotide sequence