Strain Fitness in Shewanella loihica PV-4 around Shew_1263
Experiment: 2-Furfuraldehyde 0.0625 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.0625 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 1,460,445 | - | +0.2 | |||
| 1,461,019 | + | -0.2 | |||
| 1,461,066 | - | +0.6 | |||
| 1,461,076 | - | +0.3 | |||
| 1,461,577 | + | Shew_1263 | 0.59 | +1.5 | |
| 1,461,579 | + | Shew_1263 | 0.59 | -0.0 | |
| 1,461,663 | - | Shew_1263 | 0.67 | +0.9 | |
| 1,461,844 | - | Shew_1263 | 0.86 | +0.2 | |
| 1,461,925 | + | +0.3 | |||
| 1,462,061 | - | +0.9 | |||
| 1,462,082 | + | +0.2 | |||
| 1,462,191 | + | Shew_1264 | 0.10 | -1.1 |
Or see this region's nucleotide sequence