Strain Fitness in Shewanella loihica PV-4 around Shew_0979

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
1,123,465	+		Shew_0978	0.23	+0.5
1,123,619	-		Shew_0978	0.39	+0.0
1,123,821	+		Shew_0978	0.61	-0.1
1,124,011	-		Shew_0978	0.81	+0.3
1,124,195	+				+0.5
1,124,555	+				-0.2
1,124,591	+		Shew_0979	0.11	-0.3
1,124,737	+		Shew_0979	0.17	+0.7
1,125,148	+		Shew_0979	0.34	-0.0
1,125,148	+		Shew_0979	0.34	+0.6
1,125,156	-		Shew_0979	0.34	+0.2
1,125,244	-		Shew_0979	0.38	+0.7
1,125,664	+		Shew_0979	0.55	+1.0
1,125,731	+		Shew_0979	0.58	+0.1
1,125,795	+		Shew_0979	0.60	-0.4
1,125,803	-		Shew_0979	0.61	-0.2
1,125,803	-		Shew_0979	0.61	+0.3
1,125,803	-		Shew_0979	0.61	+0.3
1,126,126	-		Shew_0979	0.74	-0.1
1,126,217	+		Shew_0979	0.77	-0.1
1,126,446	+		Shew_0979	0.87	-0.2
1,126,454	-		Shew_0979	0.87	+0.1
1,126,530	-				+0.2
1,126,625	+				+0.4
1,126,625	+				+0.1
1,126,698	+				+0.0
1,126,706	-				+0.4
1,126,933	+				-0.5
1,127,208	+				+0.1
1,127,216	-				+0.0
1,127,216	-				+0.4
1,127,216	-				-0.2
1,127,301	-				+0.3
1,127,324	-				-0.0
1,127,379	+		Shew_0980	0.10	+0.5
1,127,455	+		Shew_0980	0.13	+0.3
1,127,706	-		Shew_0980	0.20	-0.1