Strain Fitness in Shewanella loihica PV-4 around Shew_0105

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
113,001	-		Shew_0103	0.67	-0.4
113,193	-		Shew_0103	0.82	-0.3
113,321	-				+0.5
113,688	+				-0.0
113,698	-				+0.1
113,821	+				-0.3
113,936	-				-0.2
114,073	-		Shew_0105	0.11	+0.0
114,378	+		Shew_0105	0.23	+0.1
114,535	+		Shew_0105	0.29	+0.4
114,543	-		Shew_0105	0.30	+0.0
114,664	-		Shew_0105	0.35	-0.8
114,679	-		Shew_0105	0.35	-0.3
114,879	+		Shew_0105	0.43	+0.1
114,903	+		Shew_0105	0.44	+0.1
115,042	+		Shew_0105	0.49	-0.0
115,050	-		Shew_0105	0.50	+0.0
115,052	-		Shew_0105	0.50	+0.1
115,122	+		Shew_0105	0.53	-0.9
115,186	+		Shew_0105	0.55	-0.0
115,194	-		Shew_0105	0.55	-0.1
115,386	+		Shew_0105	0.63	+0.7
115,491	+		Shew_0105	0.67	-0.0
115,491	+		Shew_0105	0.67	+0.4
115,619	+		Shew_0105	0.72	+0.4
115,763	-		Shew_0105	0.78	-0.7
115,854	-		Shew_0105	0.81	+0.3
116,013	-		Shew_0105	0.88	-0.3
116,037	-		Shew_0105	0.89	-0.1
116,093	+				+0.6
116,109	+				-0.2
116,119	+				-0.7
116,208	+				-1.0
116,208	+				+0.1
116,273	+				-0.0
116,275	+				-0.0
116,283	-				+0.3
116,283	+				-0.1
116,388	+				-0.1
116,441	+				-0.3
117,200	-				-1.3