Strain Fitness in Shewanella loihica PV-4 around Shew_0041

Experiment: 2-Furfuraldehyde 0.0625 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.0625 vol%
46,459	-		Shew_0040	0.20	-0.0
46,466	-		Shew_0040	0.21	-0.2
46,486	-		Shew_0040	0.24	-0.8
46,503	-		Shew_0040	0.27	-0.4
46,782	-		Shew_0040	0.70	+0.6
46,796	+		Shew_0040	0.72	+0.1
46,895	-		Shew_0040	0.87	+0.1
47,141	-				+0.1
47,291	-				-0.3
47,467	-				+0.1
47,793	-		Shew_0041	0.15	-0.3
47,901	+		Shew_0041	0.19	-1.6
47,930	+		Shew_0041	0.19	+0.3
48,331	+		Shew_0041	0.32	-0.3
48,377	+		Shew_0041	0.33	-0.4
48,480	+		Shew_0041	0.36	+0.9
48,734	+		Shew_0041	0.44	+1.1
48,780	-		Shew_0041	0.45	-0.1
48,881	-		Shew_0041	0.48	-0.0
48,979	+		Shew_0041	0.51	-1.5
49,185	+		Shew_0041	0.58	-0.8
49,310	-		Shew_0041	0.61	-1.2
49,355	-		Shew_0041	0.63	-0.1
49,573	+		Shew_0041	0.69	-0.7
49,615	-		Shew_0041	0.71	+0.5
49,746	+		Shew_0041	0.75	-0.9
49,803	+		Shew_0041	0.76	+0.1
49,951	+		Shew_0041	0.81	-0.6
49,958	+		Shew_0041	0.81	-0.0
50,277	-				+0.3
50,288	+				-0.2
50,346	+				-0.3
50,464	+				-0.6
50,472	-				+0.1
50,482	+				-0.1
50,580	+				-0.2
50,876	-		Shew_0042	0.23	+0.0
50,945	-		Shew_0042	0.36	+0.5
51,176	+		Shew_0042	0.80	+0.4
51,214	+		Shew_0042	0.87	-0.9
51,214	+		Shew_0042	0.87	+0.4
51,222	-		Shew_0042	0.89	-0.1
51,321	-				-0.3
51,326	-				-0.7
51,336	-				-0.7
51,399	-				-1.3
51,417	+				-0.3
51,519	-		Shew_0043	0.59	+0.2
51,522	+		Shew_0043	0.60	-0.4