Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2683 and Dshi_2684 are separated by 81 nucleotides Dshi_2684 and Dshi_2685 are separated by 394 nucleotides Dshi_2685 and Dshi_2686 are separated by 302 nucleotides Dshi_2686 and Dshi_2687 are separated by 226 nucleotides
Dshi_2683: Dshi_2683 - Aldose 1-epimerase (RefSeq), at 2,843,824 to 2,844,828
_2683
Dshi_2684: Dshi_2684 - Hydroxyisourate hydrolase (RefSeq), at 2,844,910 to 2,845,275
_2684
Dshi_2685: Dshi_2685 - Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (RefSeq), at 2,845,670 to 2,846,659
_2685
Dshi_2686: Dshi_2686 - UspA domain protein (RefSeq), at 2,846,962 to 2,847,378
_2686
Dshi_2687: Dshi_2687 - pseudoazurin (RefSeq), at 2,847,605 to 2,848,090
_2687
Position (kb)
2845
2846
2847 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2844.786 kb on - strand at 2844.882 kb on + strand at 2844.901 kb on + strand at 2845.262 kb on - strand at 2845.339 kb on - strand at 2845.555 kb on - strand at 2845.586 kb on - strand at 2845.666 kb on - strand at 2845.808 kb on - strand, within Dshi_2685 at 2845.818 kb on - strand, within Dshi_2685 at 2845.827 kb on - strand, within Dshi_2685 at 2845.832 kb on - strand, within Dshi_2685 at 2845.856 kb on - strand, within Dshi_2685 at 2845.982 kb on - strand, within Dshi_2685 at 2846.097 kb on + strand, within Dshi_2685 at 2846.128 kb on + strand, within Dshi_2685 at 2846.222 kb on + strand, within Dshi_2685 at 2846.245 kb on - strand, within Dshi_2685 at 2846.294 kb on + strand, within Dshi_2685 at 2846.567 kb on + strand at 2846.580 kb on - strand at 2846.957 kb on + strand at 2846.964 kb on - strand at 2846.989 kb on + strand at 2847.050 kb on - strand, within Dshi_2686 at 2847.056 kb on + strand, within Dshi_2686 at 2847.100 kb on + strand, within Dshi_2686 at 2847.158 kb on + strand, within Dshi_2686 at 2847.171 kb on - strand, within Dshi_2686 at 2847.202 kb on - strand, within Dshi_2686 at 2847.240 kb on + strand, within Dshi_2686 at 2847.240 kb on + strand, within Dshi_2686 at 2847.647 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 2,844,786 - +0.2 2,844,882 + -0.3 2,844,901 + -0.1 2,845,262 - -0.3 2,845,339 - -0.3 2,845,555 - -0.8 2,845,586 - -0.3 2,845,666 - -0.9 2,845,808 - Dshi_2685 0.14 +0.2 2,845,818 - Dshi_2685 0.15 -0.1 2,845,827 - Dshi_2685 0.16 -0.4 2,845,832 - Dshi_2685 0.16 +0.8 2,845,856 - Dshi_2685 0.19 -2.3 2,845,982 - Dshi_2685 0.32 +0.5 2,846,097 + Dshi_2685 0.43 -0.8 2,846,128 + Dshi_2685 0.46 -0.7 2,846,222 + Dshi_2685 0.56 -1.2 2,846,245 - Dshi_2685 0.58 -0.4 2,846,294 + Dshi_2685 0.63 +0.1 2,846,567 + -0.0 2,846,580 - -0.6 2,846,957 + +1.4 2,846,964 - -0.5 2,846,989 + +0.1 2,847,050 - Dshi_2686 0.21 +0.5 2,847,056 + Dshi_2686 0.23 +0.4 2,847,100 + Dshi_2686 0.33 -0.6 2,847,158 + Dshi_2686 0.47 +2.3 2,847,171 - Dshi_2686 0.50 +0.1 2,847,202 - Dshi_2686 0.58 -0.0 2,847,240 + Dshi_2686 0.67 -1.7 2,847,240 + Dshi_2686 0.67 -0.5 2,847,647 - +0.0
Or see this region's nucleotide sequence