Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1924 and Dshi_1925 are separated by 29 nucleotides Dshi_1925 and Dshi_1926 are separated by 87 nucleotides
Dshi_1924: Dshi_1924 - TRAP transporter solute receptor, TAXI family (RefSeq), at 2,009,151 to 2,010,203
_1924
Dshi_1925: Dshi_1925 - AAA ATPase (RefSeq), at 2,010,233 to 2,012,482
_1925
Dshi_1926: Dshi_1926 - primosomal protein N' (RefSeq), at 2,012,570 to 2,014,753
_1926
Position (kb)
2010
2011
2012
2013 Strain fitness (log2 ratio)
-1
0
1 at 2009.275 kb on + strand, within Dshi_1924 at 2009.337 kb on - strand, within Dshi_1924 at 2009.409 kb on + strand, within Dshi_1924 at 2009.551 kb on - strand, within Dshi_1924 at 2009.579 kb on - strand, within Dshi_1924 at 2009.676 kb on - strand, within Dshi_1924 at 2009.681 kb on - strand, within Dshi_1924 at 2009.725 kb on - strand, within Dshi_1924 at 2009.731 kb on - strand, within Dshi_1924 at 2009.861 kb on + strand, within Dshi_1924 at 2009.893 kb on - strand, within Dshi_1924 at 2009.897 kb on + strand, within Dshi_1924 at 2009.939 kb on - strand, within Dshi_1924 at 2010.058 kb on + strand, within Dshi_1924 at 2010.066 kb on + strand, within Dshi_1924 at 2010.107 kb on + strand at 2010.118 kb on + strand at 2010.132 kb on + strand at 2010.513 kb on + strand, within Dshi_1925 at 2010.876 kb on + strand, within Dshi_1925 at 2010.876 kb on + strand, within Dshi_1925 at 2010.945 kb on + strand, within Dshi_1925 at 2010.945 kb on + strand, within Dshi_1925 at 2011.190 kb on + strand, within Dshi_1925 at 2011.239 kb on + strand, within Dshi_1925 at 2011.249 kb on + strand, within Dshi_1925 at 2011.257 kb on - strand, within Dshi_1925 at 2011.267 kb on - strand, within Dshi_1925 at 2011.372 kb on - strand, within Dshi_1925 at 2011.373 kb on - strand, within Dshi_1925 at 2011.437 kb on + strand, within Dshi_1925 at 2011.806 kb on - strand, within Dshi_1925 at 2011.848 kb on - strand, within Dshi_1925 at 2011.888 kb on - strand, within Dshi_1925 at 2011.995 kb on + strand, within Dshi_1925 at 2012.086 kb on - strand, within Dshi_1925 at 2012.232 kb on + strand, within Dshi_1925 at 2012.321 kb on - strand at 2012.321 kb on - strand at 2012.380 kb on - strand at 2012.470 kb on - strand at 2012.509 kb on - strand at 2012.548 kb on - strand at 2012.550 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 2,009,275 + Dshi_1924 0.12 -0.5 2,009,337 - Dshi_1924 0.18 -0.4 2,009,409 + Dshi_1924 0.25 -0.5 2,009,551 - Dshi_1924 0.38 -0.2 2,009,579 - Dshi_1924 0.41 -0.2 2,009,676 - Dshi_1924 0.50 -0.5 2,009,681 - Dshi_1924 0.50 +1.5 2,009,725 - Dshi_1924 0.55 +0.2 2,009,731 - Dshi_1924 0.55 +0.4 2,009,861 + Dshi_1924 0.67 -0.2 2,009,893 - Dshi_1924 0.70 +0.3 2,009,897 + Dshi_1924 0.71 -0.4 2,009,939 - Dshi_1924 0.75 -0.1 2,010,058 + Dshi_1924 0.86 +0.3 2,010,066 + Dshi_1924 0.87 +1.2 2,010,107 + -0.6 2,010,118 + +0.8 2,010,132 + +0.5 2,010,513 + Dshi_1925 0.12 +0.2 2,010,876 + Dshi_1925 0.29 -0.3 2,010,876 + Dshi_1925 0.29 +0.1 2,010,945 + Dshi_1925 0.32 -0.3 2,010,945 + Dshi_1925 0.32 -1.6 2,011,190 + Dshi_1925 0.43 +0.7 2,011,239 + Dshi_1925 0.45 -0.1 2,011,249 + Dshi_1925 0.45 +0.3 2,011,257 - Dshi_1925 0.46 +0.8 2,011,267 - Dshi_1925 0.46 +1.5 2,011,372 - Dshi_1925 0.51 +0.2 2,011,373 - Dshi_1925 0.51 +0.3 2,011,437 + Dshi_1925 0.54 +0.1 2,011,806 - Dshi_1925 0.70 +0.1 2,011,848 - Dshi_1925 0.72 +0.2 2,011,888 - Dshi_1925 0.74 +0.1 2,011,995 + Dshi_1925 0.78 +0.3 2,012,086 - Dshi_1925 0.82 +0.1 2,012,232 + Dshi_1925 0.89 +0.4 2,012,321 - -0.5 2,012,321 - -0.3 2,012,380 - +0.4 2,012,470 - -0.3 2,012,509 - +0.4 2,012,548 - -0.3 2,012,550 - +0.4
Or see this region's nucleotide sequence