Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1740 and Dshi_1741 are separated by 35 nucleotides Dshi_1741 and Dshi_1742 are separated by 95 nucleotides Dshi_1742 and Dshi_1743 are separated by 3 nucleotides Dshi_1743 and Dshi_1744 are separated by 331 nucleotides
Dshi_1740: Dshi_1740 - glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq), at 1,807,000 to 1,808,001
_1740
Dshi_1741: Dshi_1741 - hypothetical protein (RefSeq), at 1,808,037 to 1,808,192
_1741
Dshi_1742: Dshi_1742 - glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq), at 1,808,288 to 1,809,310
_1742
Dshi_1743: Dshi_1743 - GCN5-related N-acetyltransferase (RefSeq), at 1,809,314 to 1,809,916
_1743
Dshi_1744: Dshi_1744 - pantetheine-phosphate adenylyltransferase (RefSeq), at 1,810,248 to 1,810,763
_1744
Position (kb)
1808
1809
1810 Strain fitness (log2 ratio)
-1
0
1 at 1807.576 kb on + strand, within Dshi_1740 at 1807.595 kb on - strand, within Dshi_1740 at 1807.697 kb on + strand, within Dshi_1740 at 1807.731 kb on - strand, within Dshi_1740 at 1807.818 kb on - strand, within Dshi_1740 at 1807.818 kb on - strand, within Dshi_1740 at 1807.818 kb on - strand, within Dshi_1740 at 1807.913 kb on - strand at 1808.109 kb on + strand, within Dshi_1741 at 1809.540 kb on - strand, within Dshi_1743 at 1809.543 kb on + strand, within Dshi_1743 at 1809.622 kb on - strand, within Dshi_1743 at 1809.800 kb on - strand, within Dshi_1743 at 1809.948 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 1,807,576 + Dshi_1740 0.57 +0.3 1,807,595 - Dshi_1740 0.59 -0.1 1,807,697 + Dshi_1740 0.70 -0.1 1,807,731 - Dshi_1740 0.73 +1.1 1,807,818 - Dshi_1740 0.82 -0.8 1,807,818 - Dshi_1740 0.82 +0.1 1,807,818 - Dshi_1740 0.82 -0.4 1,807,913 - +0.5 1,808,109 + Dshi_1741 0.46 -0.5 1,809,540 - Dshi_1743 0.37 -0.7 1,809,543 + Dshi_1743 0.38 +0.6 1,809,622 - Dshi_1743 0.51 +0.8 1,809,800 - Dshi_1743 0.81 +0.3 1,809,948 + -0.1
Or see this region's nucleotide sequence