Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1073

Experiment: m.b. perchlorate 50 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_1070 and Dshi_1071 overlap by 4 nucleotidesDshi_1071 and Dshi_1072 overlap by 20 nucleotidesDshi_1072 and Dshi_1073 are separated by 58 nucleotidesDshi_1073 and Dshi_1074 are separated by 31 nucleotides Dshi_1070: Dshi_1070 - hypothetical protein (RefSeq), at 1,101,037 to 1,101,669 _1070 Dshi_1071: Dshi_1071 - protein of unknown function DUF74 (RefSeq), at 1,101,666 to 1,102,001 _1071 Dshi_1072: Dshi_1072 - hypothetical protein (RefSeq), at 1,101,982 to 1,102,200 _1072 Dshi_1073: Dshi_1073 - Methionine synthase (RefSeq), at 1,102,259 to 1,103,038 _1073 Dshi_1074: Dshi_1074 - homocysteine S-methyltransferase (RefSeq), at 1,103,070 to 1,104,095 _1074 Position (kb) 1102 1103 1104Strain fitness (log2 ratio) -1 0 1at 1101.688 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM
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1,101,688 + -0.4

Or see this region's nucleotide sequence