Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0006

Experiment: m.b. perchlorate 50 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. perchlorate 50 mM
8,028	+		Dshi_0004	0.90	+0.3
8,028	+		Dshi_0004	0.90	+0.9
8,028	+		Dshi_0004	0.90	-0.2
8,028	+		Dshi_0004	0.90	-1.6
8,031	-				+0.1
8,036	-				+0.0
8,036	-				-1.2
8,036	-				+0.7
8,036	-				-0.5
8,048	-				-0.2
8,085	+				+0.4
8,117	-				+2.1
8,141	-				+0.6
8,205	-				+0.4
8,259	+				-0.2
8,351	+		Dshi_0005	0.19	+0.0
8,449	-		Dshi_0005	0.32	-0.2
8,569	+		Dshi_0005	0.50	+1.8
8,587	-		Dshi_0005	0.52	+0.2
8,647	+		Dshi_0005	0.61	+0.9
8,683	+		Dshi_0005	0.66	+0.3
8,828	-		Dshi_0005	0.86	+0.6
8,830	+		Dshi_0005	0.87	-0.8
9,858	-				+0.1
9,866	-				+0.2
9,880	+				-0.5
9,880	+				+0.1
9,880	+				-0.4
9,885	+				+0.0
9,885	+				-1.4
9,888	-				-0.0
9,888	-				+0.6
9,890	+				+0.7
9,890	+				-0.8
9,895	+				+0.1
9,898	-				-1.9
9,900	-				+1.4
9,903	-				-0.5
9,913	-				+0.4
9,913	-				-1.0
9,915	+				-0.3
9,915	+				-1.2
9,917	+				+0.5
9,923	-				+0.1
9,924	-				+0.2
9,958	-				+0.1
9,959	-				-0.2
9,967	-				+0.0
9,972	+				+0.4
9,972	+				-0.4
9,972	+				-0.2
9,979	-				-0.2
9,980	-				-0.2
9,980	-				+0.1
9,980	-				+0.7
9,980	-				-1.0
9,980	-				+1.2
9,980	-				+0.1
9,980	-				-0.3
9,980	-				+0.1
9,980	-				+0.2
9,980	-				+0.3
9,985	+				+0.2
9,988	-				-0.1
9,988	-				+0.5
10,040	+				+0.1
10,049	-				-0.7
10,049	-				-0.0
10,070	-				+0.7
10,083	-				+0.4
10,121	+				-0.1
10,124	+				+0.4
10,125	+				-0.8
10,125	+				-0.5
10,131	-				-0.2
10,132	-				-0.2
10,135	+				-0.7
10,158	+				+0.4
10,180	+				+0.8
10,189	+				+0.1
10,189	+				+1.9
10,197	-				-0.2
10,197	-				-0.6
10,234	+				+0.6
10,242	-				-0.7
10,242	-				+1.1
10,254	+				+0.4
10,259	+				+0.3
10,267	-				+0.1
10,269	+				+0.0
10,324	-				-0.6
10,326	-				+1.1
10,328	+				+0.7
10,328	+				+1.6
10,328	+				-0.1
10,331	-				+0.4
10,333	+				-0.1
10,333	+				+0.1
10,333	+				+0.5
10,333	+				-1.2
10,333	+				-0.5
10,333	+				+0.5
10,333	+				+0.3
10,333	+				+0.4
10,333	+				+0.2
10,333	+				-0.3
10,333	+				+0.4
10,336	-				-0.1
10,336	-				-3.1
10,340	-				-0.5
10,340	-				-0.7
10,341	-				+0.6
10,341	-				+0.0
10,341	-				+0.4
10,341	-				+2.4
10,341	-				-0.4
10,341	-				-0.2
10,341	-				-0.2
10,341	-				-0.4
10,341	-				-0.7
10,341	-				-0.0
10,341	-				+0.3
10,345	+				+0.2
10,353	-				+0.7
10,355	+				+0.5
10,361	+				+1.2
10,363	-				+0.4
10,366	+				+0.2
10,366	+				-0.6
10,366	+				+0.3
10,369	+				-1.0
10,374	+				+1.0
10,390	+				+0.4
10,390	+				-0.2
10,390	+				+0.3
10,390	+				-0.5
10,392	+				-0.2
10,392	+				+0.5
10,392	+				+0.3
10,392	+				-0.3
10,392	+				+0.3
10,392	+				+1.8
10,392	+				-1.2
10,392	+				-0.7
10,392	+				+0.9
10,392	+				+0.6
10,392	+				+0.1
10,392	+				-0.6
10,392	+				-1.2
10,392	+				+1.2
10,392	+				+1.1
10,392	+				+1.6
10,392	+				-0.5
10,392	+				+0.1
10,392	+				+0.6
10,396	+				-0.0
10,398	-				+0.8
10,398	-				+0.1
10,398	-				+1.8
10,398	-				-0.1
10,398	-				+1.6
10,398	-				+1.2
10,398	-				+0.1
10,398	-				-0.9
10,399	+				-0.6
10,399	+				+3.2
10,399	+				+0.8
10,399	+				+0.5
10,399	+				+2.0
10,400	-				-0.0
10,400	-				+1.4
10,400	-				+1.0
10,400	-				-1.2
10,400	-				-0.4
10,400	-				-0.2
10,400	-				+0.5
10,400	-				+0.2
10,400	-				-1.6
10,402	+				+0.0
10,402	+				+0.1
10,402	-				+0.1
10,404	+				+0.7
10,407	-				+0.2
10,407	-				+0.5
10,407	-				-1.1
10,407	-				+0.2
10,407	-				+1.2
10,407	-				-0.1
10,407	-				-0.8
10,407	-				-1.0
10,407	-				+0.3
10,407	-				-1.4
10,407	-				+0.4
10,410	-				-1.2
10,410	-				+0.5
10,417	+				-0.6
10,425	-				+0.5
10,430	-				-1.1
10,434	+				-0.9
10,444	+				+0.1
10,448	+				+0.3
10,449	+				-0.2
10,449	+				+0.4
10,457	-				+0.1
10,463	-				-0.6
10,463	-				+0.9
10,478	-				-0.0
10,511	+				+0.5
10,535	+				-1.0
10,562	-				+2.5
10,587	+				-0.2
10,617	-				+1.2
10,619	-				-0.3
10,627	+				+0.4
10,634	-				-0.2
10,635	-				-0.5
10,673	+				+0.4
10,673	+				-0.5
10,675	+				-0.1
10,681	-				+0.5
10,681	-				+0.1
10,685	+				-0.3
10,685	+				+0.9
10,687	+				-0.5
10,695	-				+0.1
10,702	+				-0.9
10,705	-				-0.6
10,707	+				+0.8
10,707	+				+0.3
10,709	+				-0.0
10,709	+				-0.7
10,710	-				-0.5
10,715	-				-0.5
10,715	-				-0.1
10,717	-				-1.1
10,717	-				+0.2
10,717	-				-0.1
10,717	-				-1.2
10,721	+				-1.5
10,721	+				+0.3
10,721	+				-1.0
10,722	+				+0.5
10,722	+				+0.2
10,722	+				+1.1
10,722	+				-0.1
10,722	+				-0.5
10,722	+				+0.2
10,722	+				+2.2
10,722	-				+1.8
10,722	-				+1.0
10,729	-				-0.3
10,729	-				-0.2
10,729	-				+0.4
10,730	-				+1.0
10,730	-				+0.1
10,730	-				+0.2
10,730	-				-0.4
10,730	-				-1.4
10,730	-				-0.2
10,730	-				-0.3
10,733	+				-0.1
10,741	-		Dshi_0008	0.10	+0.1
10,745	-		Dshi_0008	0.11	+0.5
10,749	-		Dshi_0008	0.12	+0.1
10,750	-		Dshi_0008	0.12	-0.2
10,750	-		Dshi_0008	0.12	-1.4
10,751	+		Dshi_0008	0.12	+0.7
10,751	+		Dshi_0008	0.12	+1.4
10,751	-		Dshi_0008	0.12	-0.2
10,757	+		Dshi_0008	0.13	+0.6
10,757	+		Dshi_0008	0.13	+0.6
10,757	+		Dshi_0008	0.13	+0.0
10,757	+				+1.4
10,759	-		Dshi_0008	0.13	+0.6
10,759	-		Dshi_0008	0.13	-0.2
10,759	-		Dshi_0008	0.13	-2.5
10,759	-		Dshi_0008	0.13	-1.2
10,759	-		Dshi_0008	0.13	-0.2
10,762	+		Dshi_0008	0.14	+1.2
10,765	-		Dshi_0008	0.14	-0.5
10,765	-		Dshi_0008	0.14	+1.0
10,765	-		Dshi_0008	0.14	+0.8
10,767	+		Dshi_0008	0.15	+0.9
10,776	-		Dshi_0008	0.16	+0.3
10,787	-		Dshi_0008	0.18	+0.2
10,787	-		Dshi_0008	0.18	+0.7
10,794	-		Dshi_0008	0.19	+1.1
10,803	-		Dshi_0008	0.21	+0.7
10,804	-		Dshi_0008	0.21	-0.2
10,819	-		Dshi_0008	0.24	-0.8
10,821	+		Dshi_0008	0.24	-0.1
10,835	-		Dshi_0008	0.27	+0.1
10,838	+		Dshi_0008	0.27	-1.5
10,843	+		Dshi_0008	0.28	+0.4
10,851	-		Dshi_0008	0.29	+0.2