Experiment: MoLS4 with L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2057 and DVU2058 are separated by 205 nucleotides DVU2058 and DVU2059 are separated by 14 nucleotides
DVU2057: DVU2057 - conserved hypothetical protein (TIGR), at 2,133,364 to 2,134,827
DVU2057
DVU2058: DVU2058 - HDIG domain protein (TIGR), at 2,135,033 to 2,135,596
DVU2058
DVU2059: DVU2059 - glycosyl transferase, group 2 family protein (TIGR), at 2,135,611 to 2,136,603
DVU2059
Position (kb)
2135
2136 Strain fitness (log2 ratio)
-1
0
1 at 2134.699 kb on - strand at 2135.038 kb on + strand at 2135.225 kb on + strand, within DVU2058 at 2135.225 kb on + strand, within DVU2058 at 2135.320 kb on + strand, within DVU2058 at 2135.335 kb on + strand, within DVU2058 at 2135.343 kb on - strand, within DVU2058 at 2135.350 kb on + strand, within DVU2058 at 2135.350 kb on + strand, within DVU2058 at 2135.353 kb on - strand, within DVU2058 at 2135.358 kb on - strand, within DVU2058 at 2135.358 kb on - strand, within DVU2058 at 2135.435 kb on - strand, within DVU2058 at 2135.597 kb on + strand at 2135.616 kb on + strand at 2135.779 kb on + strand, within DVU2059 at 2135.909 kb on - strand, within DVU2059 at 2135.975 kb on - strand, within DVU2059 at 2135.984 kb on + strand, within DVU2059 at 2136.043 kb on - strand, within DVU2059 at 2136.058 kb on + strand, within DVU2059 at 2136.132 kb on + strand, within DVU2059 at 2136.135 kb on - strand, within DVU2059 at 2136.309 kb on + strand, within DVU2059 at 2136.317 kb on - strand, within DVU2059 at 2136.334 kb on + strand, within DVU2059 at 2136.346 kb on + strand, within DVU2059 at 2136.349 kb on - strand, within DVU2059 at 2136.432 kb on + strand, within DVU2059 at 2136.432 kb on + strand, within DVU2059 at 2136.440 kb on - strand, within DVU2059 at 2136.440 kb on - strand, within DVU2059 at 2136.457 kb on + strand, within DVU2059 at 2136.514 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Asparagine (N) remove 2,134,699 - +0.4 2,135,038 + +0.0 2,135,225 + DVU2058 0.34 -1.4 2,135,225 + DVU2058 0.34 +1.1 2,135,320 + DVU2058 0.51 -0.8 2,135,335 + DVU2058 0.54 -0.4 2,135,343 - DVU2058 0.55 -1.7 2,135,350 + DVU2058 0.56 -1.0 2,135,350 + DVU2058 0.56 -0.1 2,135,353 - DVU2058 0.57 -0.7 2,135,358 - DVU2058 0.58 -0.2 2,135,358 - DVU2058 0.58 -0.3 2,135,435 - DVU2058 0.71 -1.5 2,135,597 + -0.1 2,135,616 + -0.1 2,135,779 + DVU2059 0.17 -0.1 2,135,909 - DVU2059 0.30 -0.5 2,135,975 - DVU2059 0.37 -1.7 2,135,984 + DVU2059 0.38 +0.4 2,136,043 - DVU2059 0.44 -0.1 2,136,058 + DVU2059 0.45 +1.4 2,136,132 + DVU2059 0.52 -1.1 2,136,135 - DVU2059 0.53 -0.2 2,136,309 + DVU2059 0.70 -0.2 2,136,317 - DVU2059 0.71 -0.6 2,136,334 + DVU2059 0.73 -0.9 2,136,346 + DVU2059 0.74 -0.1 2,136,349 - DVU2059 0.74 +0.0 2,136,432 + DVU2059 0.83 -0.5 2,136,432 + DVU2059 0.83 -1.1 2,136,440 - DVU2059 0.83 -0.0 2,136,440 - DVU2059 0.83 -0.1 2,136,457 + DVU2059 0.85 +0.1 2,136,514 + -0.0
Or see this region's nucleotide sequence