Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1817

Experiment: L-Malic Acid (C) and N2; high light

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic Acid (C) and N2; high light
2,112,884	-		Rru_A1816	0.51	-1.1
2,112,962	-		Rru_A1816	0.56	-1.2
2,113,047	+		Rru_A1816	0.60	-0.1
2,113,047	+		Rru_A1816	0.60	-0.1
2,113,047	+		Rru_A1816	0.60	-0.1
2,113,047	+		Rru_A1816	0.60	-2.1
2,113,047	+		Rru_A1816	0.60	-0.1
2,113,047	+		Rru_A1816	0.60	-1.3
2,113,048	-		Rru_A1816	0.60	-1.1
2,113,048	-		Rru_A1816	0.60	-0.1
2,113,050	+		Rru_A1816	0.61	-0.7
2,113,051	-		Rru_A1816	0.61	-0.1
2,113,225	+		Rru_A1816	0.70	-1.1
2,113,225	+		Rru_A1816	0.70	-0.1
2,113,225	+		Rru_A1816	0.70	-1.4
2,113,225	+		Rru_A1816	0.70	-0.1
2,113,226	-		Rru_A1816	0.70	-0.1
2,113,226	-		Rru_A1816	0.70	-0.1
2,113,226	-		Rru_A1816	0.70	-0.1
2,113,265	-		Rru_A1816	0.72	-0.1
2,113,265	-		Rru_A1816	0.72	-0.1
2,113,310	-		Rru_A1816	0.75	-0.1
2,113,310	-		Rru_A1816	0.75	-0.1
2,113,312	+		Rru_A1816	0.75	-1.0
2,113,312	+		Rru_A1816	0.75	-0.1
2,113,312	+		Rru_A1816	0.75	-0.1
2,113,313	-		Rru_A1816	0.75	-0.1
2,113,313	-		Rru_A1816	0.75	-0.1
2,113,327	+		Rru_A1816	0.76	-0.1
2,113,327	+		Rru_A1816	0.76	-0.1
2,113,327	+		Rru_A1816	0.76	-0.1
2,113,328	-		Rru_A1816	0.76	-0.1
2,113,477	+		Rru_A1816	0.84	-0.1
2,113,604	+				-1.2
2,113,741	+				-1.3
2,113,741	+				-0.1
2,113,742	-				-0.1
2,113,752	+				-0.1
2,113,816	+				-0.1
2,113,847	-				-0.1
2,113,878	+				-0.1
2,113,878	+				-0.1
2,113,878	+				-0.1
2,113,878	+				-0.1
2,113,879	-				-0.1
2,114,096	-				-0.1
2,114,215	+		Rru_A1817	0.13	-0.1
2,114,215	+		Rru_A1817	0.13	-0.1
2,114,215	+		Rru_A1817	0.13	-0.1
2,114,216	-		Rru_A1817	0.13	-1.1
2,114,216	-		Rru_A1817	0.13	-0.1
2,114,216	-		Rru_A1817	0.13	-0.1
2,114,335	+		Rru_A1817	0.17	-1.9
2,114,335	+		Rru_A1817	0.17	-0.1
2,114,335	+		Rru_A1817	0.17	-0.1
2,114,335	+		Rru_A1817	0.17	-0.1
2,114,336	-		Rru_A1817	0.17	-1.1
2,114,336	-		Rru_A1817	0.17	-0.1
2,114,336	-		Rru_A1817	0.17	-0.1
2,114,394	+		Rru_A1817	0.19	-0.1
2,114,394	+		Rru_A1817	0.19	-0.1
2,114,395	-		Rru_A1817	0.19	-0.1
2,114,455	+		Rru_A1817	0.21	-0.1
2,114,455	+		Rru_A1817	0.21	-0.1
2,114,455	+		Rru_A1817	0.21	-2.3
2,114,989	-		Rru_A1817	0.40	-0.1
2,114,997	+		Rru_A1817	0.41	-0.1
2,115,055	-		Rru_A1817	0.43	-0.1
2,115,066	+		Rru_A1817	0.43	-0.8
2,115,066	+		Rru_A1817	0.43	-0.1
2,115,084	-		Rru_A1817	0.44	-1.7
2,115,084	-		Rru_A1817	0.44	-1.9
2,115,084	-		Rru_A1817	0.44	-0.1
2,115,084	-		Rru_A1817	0.44	-0.1
2,115,323	+		Rru_A1817	0.52	-0.1
2,115,338	+		Rru_A1817	0.53	-1.7
2,115,454	+		Rru_A1817	0.57	-0.1
2,115,457	+		Rru_A1817	0.57	-0.1
2,115,457	+		Rru_A1817	0.57	-0.1
2,115,458	-		Rru_A1817	0.57	-0.1
2,115,577	+		Rru_A1817	0.61	-0.1
2,115,577	+		Rru_A1817	0.61	-0.1
2,115,577	+		Rru_A1817	0.61	-0.9
2,115,577	+		Rru_A1817	0.61	-0.1
2,115,577	+		Rru_A1817	0.61	-1.2
2,115,577	+		Rru_A1817	0.61	-1.0
2,115,577	+		Rru_A1817	0.61	-0.1
2,115,577	+		Rru_A1817	0.61	-1.2
2,115,578	-		Rru_A1817	0.61	-0.1
2,115,578	-		Rru_A1817	0.61	-0.1
2,115,578	-		Rru_A1817	0.61	-1.4
2,115,578	-		Rru_A1817	0.61	-0.1
2,115,578	-		Rru_A1817	0.61	-1.2
2,115,578	-		Rru_A1817	0.61	-1.6
2,115,580	+		Rru_A1817	0.61	-1.0
2,115,580	+		Rru_A1817	0.61	-0.1
2,115,581	-		Rru_A1817	0.61	-0.1
2,115,581	-		Rru_A1817	0.61	-0.1
2,115,581	-		Rru_A1817	0.61	-0.1
2,115,581	-		Rru_A1817	0.61	-0.1
2,115,581	-		Rru_A1817	0.61	-1.3
2,115,581	-		Rru_A1817	0.61	-0.1
2,115,629	+		Rru_A1817	0.63	-1.1
2,115,725	+		Rru_A1817	0.66	-0.1
2,115,733	+		Rru_A1817	0.67	-0.1
2,115,733	+		Rru_A1817	0.67	-0.1
2,115,733	+		Rru_A1817	0.67	-1.7
2,115,733	+		Rru_A1817	0.67	-0.1
2,115,734	-		Rru_A1817	0.67	-1.1
2,115,734	-		Rru_A1817	0.67	-0.1
2,115,734	-		Rru_A1817	0.67	-0.1
2,115,734	-		Rru_A1817	0.67	-0.1
2,115,734	-		Rru_A1817	0.67	-2.5
2,115,904	-		Rru_A1817	0.73	-0.1
2,115,959	+		Rru_A1817	0.74	-0.1
2,115,960	-		Rru_A1817	0.75	-0.1
2,115,965	+		Rru_A1817	0.75	-0.1
2,115,966	-		Rru_A1817	0.75	-0.1
2,116,016	+		Rru_A1817	0.76	-0.9
2,116,016	+		Rru_A1817	0.76	-1.2
2,116,017	-		Rru_A1817	0.77	-0.1
2,116,017	-		Rru_A1817	0.77	-2.1
2,116,118	-		Rru_A1817	0.80	-0.1
2,116,118	-		Rru_A1817	0.80	-0.1
2,116,118	-		Rru_A1817	0.80	-0.9
2,116,118	-		Rru_A1817	0.80	-0.1
2,116,118	-		Rru_A1817	0.80	-0.1
2,116,153	+		Rru_A1817	0.81	-0.1
2,116,216	-		Rru_A1817	0.84	-0.1
2,116,234	-		Rru_A1817	0.84	-1.0
2,116,234	-		Rru_A1817	0.84	-0.1
2,116,234	-		Rru_A1817	0.84	-1.7
2,116,234	-		Rru_A1817	0.84	-0.7
2,116,284	-		Rru_A1817	0.86	-1.2
2,116,313	+		Rru_A1817	0.87	-1.1
2,116,313	+		Rru_A1817	0.87	-0.1
2,116,313	+		Rru_A1817	0.87	-0.1
2,116,314	-		Rru_A1817	0.87	-0.1
2,116,329	-		Rru_A1817	0.88	-0.1
2,116,329	-		Rru_A1817	0.88	-0.1
2,116,350	+		Rru_A1817	0.88	-0.1
2,116,351	-		Rru_A1817	0.88	-0.9
2,116,389	+		Rru_A1817	0.90	-1.3
2,116,507	+				-0.1
2,116,508	-				-0.1
2,116,508	-				-0.1
2,116,508	-				-1.1
2,116,660	+				-0.1
2,116,660	+				-1.3
2,116,660	+				-2.1
2,116,661	-				-1.1
2,116,664	+				-1.1
2,116,664	+				-0.8
2,116,664	+				-0.1
2,116,664	+				-1.3
2,116,664	+				-0.1
2,116,664	+				-0.1
2,116,664	+				-0.1
2,116,665	-				-0.1
2,116,665	-				-0.1
2,116,665	-				-0.1
2,116,665	-				-0.1
2,116,665	-				-0.1
2,116,665	-				-1.3
2,116,817	-				-0.1
2,116,819	+				-1.1
2,116,820	-				-1.1
2,116,863	+				-0.1
2,116,863	+				-0.1
2,116,928	-				-1.7
2,117,014	+				-0.1
2,117,014	+				-1.3
2,117,014	+				-1.7
2,117,014	+				-0.1
2,117,052	-				-1.5
2,117,052	-				-0.1
2,117,095	+				-1.6
2,117,095	+				-0.1
2,117,095	+				-1.5
2,117,095	+				-1.4
2,117,096	-				-1.9
2,117,096	-				-2.0
2,117,096	-				-0.1
2,117,096	-				-1.7
2,117,236	+		Rru_A1818	0.15	-1.4
2,117,237	-		Rru_A1818	0.15	-0.1
2,117,237	-		Rru_A1818	0.15	-0.1
2,117,237	-		Rru_A1818	0.15	-1.5
2,117,326	+		Rru_A1818	0.19	-0.1
2,117,326	+		Rru_A1818	0.19	-1.8
2,117,446	+		Rru_A1818	0.25	-1.7
2,117,447	-		Rru_A1818	0.25	-0.1
2,117,447	-		Rru_A1818	0.25	-0.1
2,117,485	+		Rru_A1818	0.27	-0.1
2,117,485	+		Rru_A1818	0.27	-0.1
2,117,486	-		Rru_A1818	0.27	-0.1
2,117,486	-		Rru_A1818	0.27	-1.2
2,117,486	-		Rru_A1818	0.27	-0.1
2,117,486	-		Rru_A1818	0.27	-0.1
2,117,533	+		Rru_A1818	0.29	-0.1
2,117,573	+		Rru_A1818	0.31	-0.1
2,117,574	-		Rru_A1818	0.31	-0.1
2,117,575	+		Rru_A1818	0.31	-1.8
2,117,575	+		Rru_A1818	0.31	-1.1
2,117,576	-		Rru_A1818	0.31	-0.1
2,117,576	-		Rru_A1818	0.31	-1.7
2,117,576	-		Rru_A1818	0.31	-1.1
2,117,619	-		Rru_A1818	0.33	-1.7
2,117,623	+		Rru_A1818	0.33	-0.1
2,117,624	-		Rru_A1818	0.33	-0.1
2,117,624	-		Rru_A1818	0.33	-0.1
2,117,624	-		Rru_A1818	0.33	-0.1
2,117,624	-		Rru_A1818	0.33	-1.6