Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03565

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
3,719,443	-				-0.6
3,719,451	-				-1.5
3,719,464	-		CCNA_03564	0.11	+0.1
3,719,488	+		CCNA_03564	0.21	-0.2
3,719,498	+		CCNA_03564	0.25	+2.4
3,719,498	+		CCNA_03564	0.25	+0.4
3,719,502	+		CCNA_03564	0.27	-0.4
3,719,503	+		CCNA_03564	0.27	-0.7
3,719,510	-		CCNA_03564	0.30	-2.4
3,719,510	-		CCNA_03564	0.30	-0.6
3,719,510	-		CCNA_03564	0.30	+0.8
3,719,512	+		CCNA_03564	0.31	-0.2
3,719,547	-		CCNA_03564	0.45	-0.4
3,719,552	-		CCNA_03564	0.47	+1.1
3,719,552	-		CCNA_03564	0.47	+1.0
3,719,624	+		CCNA_03564	0.78	-0.4
3,719,631	+		CCNA_03564	0.80	-1.7
3,719,631	+		CCNA_03564	0.80	+0.2
3,719,631	+		CCNA_03564	0.80	-0.9
3,719,639	-		CCNA_03564	0.84	-1.5
3,719,639	-		CCNA_03564	0.84	-0.0
3,719,666	+				-1.2
3,719,680	+				+0.1
3,719,737	+				-0.7
3,719,770	-				+0.8
3,719,771	-				+0.0
3,719,776	-				-0.5
3,719,800	+				+0.1
3,719,819	-				+0.2
3,719,819	-				+0.2
3,719,867	+		CCNA_03565	0.11	-1.0
3,719,867	+		CCNA_03565	0.11	-0.6
3,719,872	+		CCNA_03565	0.13	+2.4
3,719,875	-		CCNA_03565	0.14	-0.0
3,719,888	-		CCNA_03565	0.18	+0.3
3,719,927	-		CCNA_03565	0.30	+0.1
3,719,936	-		CCNA_03565	0.32	+3.2
3,719,941	+		CCNA_03565	0.34	+2.4
3,719,966	-		CCNA_03565	0.42	-0.2
3,719,975	+		CCNA_03565	0.44	+1.4
3,719,983	-		CCNA_03565	0.47	+0.6
3,720,008	+		CCNA_03565	0.55	+0.1
3,720,016	-		CCNA_03565	0.57	-1.5
3,720,016	-		CCNA_03565	0.57	-0.2
3,720,033	+		CCNA_03565	0.62	-0.9
3,720,033	+		CCNA_03565	0.62	+0.8
3,720,033	+		CCNA_03565	0.62	-0.3
3,720,033	+		CCNA_03565	0.62	-0.5
3,720,033	+		CCNA_03565	0.62	+0.4
3,720,041	-		CCNA_03565	0.65	+0.4
3,720,042	-		CCNA_03565	0.65	-1.4
3,720,042	-		CCNA_03565	0.65	+0.2
3,720,057	-		CCNA_03565	0.70	+0.8
3,720,062	-		CCNA_03565	0.71	+1.2
3,720,117	-		CCNA_03565	0.88	-0.2
3,720,121	+		CCNA_03565	0.90	-0.4
3,720,188	-				+0.4
3,720,198	-				-0.6
3,720,227	+				+0.4
3,720,377	+				-1.1
3,720,378	+				+0.2
3,720,398	+				-1.0
3,720,412	+				-0.9
3,720,413	-				-1.1
3,720,434	+				-1.4
3,720,442	-		CCNA_03993	0.10	-0.1
3,720,442	-		CCNA_03993	0.10	+0.8
3,720,454	+		CCNA_03993	0.13	+0.4
3,720,454	+		CCNA_03993	0.13	-0.8
3,720,462	-		CCNA_03993	0.15	-0.9
3,720,462	-		CCNA_03993	0.15	-0.1
3,720,467	+		CCNA_03993	0.16	-0.9
3,720,469	-		CCNA_03993	0.17	-0.7
3,720,516	+		CCNA_03993	0.28	-0.4
3,720,565	+		CCNA_03993	0.40	+0.8
3,720,565	+		CCNA_03993	0.40	-1.1
3,720,568	-		CCNA_03993	0.40	-0.1
3,720,568	-		CCNA_03993	0.40	+2.4
3,720,582	-		CCNA_03993	0.44	+0.4
3,720,597	-		CCNA_03993	0.47	-1.3
3,720,597	-		CCNA_03993	0.47	+1.0
3,720,597	-		CCNA_03993	0.47	+0.2
3,720,616	-		CCNA_03993	0.52	+0.5
3,720,616	-		CCNA_03993	0.52	+0.2
3,720,622	+		CCNA_03993	0.53	+0.8
3,720,622	+		CCNA_03993	0.53	-1.2
3,720,622	+		CCNA_03993	0.53	+0.1
3,720,622	+		CCNA_03993	0.53	+0.4
3,720,630	-		CCNA_03993	0.55	+0.1
3,720,630	-		CCNA_03993	0.55	+0.0
3,720,630	-		CCNA_03993	0.55	+0.2
3,720,630	-		CCNA_03993	0.55	+0.1
3,720,630	-		CCNA_03993	0.55	-0.3
3,720,750	-		CCNA_03993	0.84	+0.7
3,720,833	+				-0.2
3,720,833	+				-0.1
3,720,833	+				+0.1
3,720,838	+				+0.8
3,720,841	-				+0.1
3,720,841	-				+0.4
3,720,841	-				+1.4
3,720,841	-				-0.4
3,720,841	-				+0.4
3,720,841	-				+1.0
3,720,846	-				+0.8
3,720,868	-				-0.4
3,720,933	-				+0.1
3,720,948	+				-0.4
3,720,962	-				-1.8
3,720,988	-				-0.8
3,720,999	-				-0.2
3,720,999	-				-1.8
3,721,048	-				+0.1
3,721,058	+				-0.4
3,721,071	-				-0.4
3,721,071	-				-0.9
3,721,085	+		CCNA_03567	0.10	+1.4
3,721,093	-		CCNA_03567	0.11	+0.1
3,721,103	-		CCNA_03567	0.12	+0.1
3,721,134	-		CCNA_03567	0.14	-0.4
3,721,147	-		CCNA_03567	0.15	-0.4