Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03401

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
3,569,381	+				+0.6
3,569,382	-				-0.2
3,569,382	-				-0.5
3,569,392	+				+0.6
3,569,402	+				+1.2
3,569,402	+				+1.6
3,569,410	-				-0.3
3,569,410	-				-1.9
3,569,410	-				-1.0
3,569,412	-				+0.0
3,569,418	-				+2.1
3,570,040	-				-0.2
3,570,092	-				+0.4
3,570,107	-				-2.3
3,570,114	+				-0.1
3,570,197	-		CCNA_03400	0.42	+0.2
3,570,221	-		CCNA_03400	0.56	+0.7
3,570,223	+		CCNA_03400	0.57	+2.3
3,570,234	+		CCNA_03400	0.63	+0.9
3,570,350	-				+1.2
3,570,383	-				+1.4
3,570,414	-				+1.5
3,570,427	+				+0.2
3,570,441	-				+1.7
3,570,441	-				+2.7
3,570,519	-		CCNA_03401	0.20	+1.0
3,570,548	+		CCNA_03401	0.24	+0.6
3,570,548	+		CCNA_03401	0.24	+0.8
3,570,556	-		CCNA_03401	0.25	+0.4
3,570,556	-		CCNA_03401	0.25	+0.6
3,570,559	+		CCNA_03401	0.25	+0.6
3,570,609	-		CCNA_03401	0.32	+3.0
3,570,609	-		CCNA_03401	0.32	+3.3
3,570,609	-		CCNA_03401	0.32	+2.2
3,570,628	-		CCNA_03401	0.35	+3.7
3,570,651	-		CCNA_03401	0.38	+3.0
3,570,651	-		CCNA_03401	0.38	+2.5
3,570,716	-		CCNA_03401	0.47	+4.9
3,570,837	-		CCNA_03401	0.64	+4.0
3,570,849	+		CCNA_03401	0.66	-0.8
3,570,905	-		CCNA_03401	0.74	+3.6
3,571,139	-				+3.5
3,571,158	-				+4.0
3,571,158	-				+4.0
3,571,216	-				-0.9
3,571,216	-				+0.1
3,571,222	+				-0.4
3,571,256	-				-0.4
3,571,264	+				-0.2
3,571,345	+		CCNA_03402	0.12	+1.2
3,571,359	-		CCNA_03402	0.13	+0.6
3,571,363	-		CCNA_03402	0.13	-1.3
3,571,365	-		CCNA_03402	0.14	-1.1
3,571,397	+		CCNA_03402	0.17	+1.0
3,571,423	-		CCNA_03402	0.20	+0.4
3,571,423	-		CCNA_03402	0.20	-0.8
3,571,423	-				+2.6
3,571,438	+		CCNA_03402	0.21	+1.0
3,571,453	-		CCNA_03402	0.23	-0.3
3,571,463	-		CCNA_03402	0.24	-0.9
3,571,492	+		CCNA_03402	0.27	-1.0
3,571,495	-		CCNA_03402	0.27	+0.5
3,571,574	+		CCNA_03402	0.35	+0.2
3,571,582	-		CCNA_03402	0.36	-0.7
3,571,596	+		CCNA_03402	0.37	+1.3
3,571,606	-		CCNA_03402	0.38	-0.9
3,571,606	-		CCNA_03402	0.38	+0.2
3,571,608	+		CCNA_03402	0.39	-2.1
3,571,614	-		CCNA_03402	0.39	-1.4
3,571,616	+		CCNA_03402	0.39	-2.0
3,571,616	+		CCNA_03402	0.39	+1.6
3,571,624	-		CCNA_03402	0.40	+0.6
3,571,624	-		CCNA_03402	0.40	-0.9
3,571,624	-		CCNA_03402	0.40	-0.5
3,571,631	-		CCNA_03402	0.41	+0.5
3,571,631	-		CCNA_03402	0.41	+1.3
3,571,631	-		CCNA_03402	0.41	+1.7
3,571,631	-		CCNA_03402	0.41	-0.4
3,571,654	+		CCNA_03402	0.43	-0.9
3,571,654	+		CCNA_03402	0.43	-0.4
3,571,654	+		CCNA_03402	0.43	+1.0
3,571,662	+		CCNA_03402	0.44	+0.9
3,571,710	-		CCNA_03402	0.49	+0.1
3,571,716	+		CCNA_03402	0.50	-0.9
3,571,724	-		CCNA_03402	0.50	-2.6
3,571,729	-		CCNA_03402	0.51	-0.8
3,571,793	-		CCNA_03402	0.58	-0.7
3,571,810	-		CCNA_03402	0.59	-0.5
3,571,831	-		CCNA_03402	0.61	-2.2
3,571,833	+		CCNA_03402	0.62	-0.4
3,571,833	+		CCNA_03402	0.62	-0.4
3,571,841	-		CCNA_03402	0.62	-2.5
3,571,841	-		CCNA_03402	0.62	+0.2
3,571,841	-		CCNA_03402	0.62	-0.8
3,571,851	+		CCNA_03402	0.63	+2.6
3,571,858	-		CCNA_03402	0.64	+1.7
3,571,894	-		CCNA_03402	0.68	+0.1
3,571,913	-		CCNA_03402	0.70	-0.2
3,571,931	+		CCNA_03402	0.72	+0.6
3,571,931	+		CCNA_03402	0.72	-0.9
3,571,939	-		CCNA_03402	0.73	-0.5
3,571,939	-		CCNA_03402	0.73	-0.3
3,571,939	-		CCNA_03402	0.73	-0.4
3,571,939	-		CCNA_03402	0.73	-2.2
3,571,939	-		CCNA_03402	0.73	-0.8
3,571,941	+		CCNA_03402	0.73	-0.2
3,571,941	+		CCNA_03402	0.73	-0.3
3,571,949	-		CCNA_03402	0.74	+0.6
3,571,949	-		CCNA_03402	0.74	-1.1
3,571,979	+		CCNA_03402	0.77	+0.2
3,571,999	+		CCNA_03402	0.79	-1.6
3,571,999	+		CCNA_03402	0.79	+1.2
3,571,999	+		CCNA_03402	0.79	-0.2
3,571,999	+		CCNA_03402	0.79	-2.6
3,571,999	+		CCNA_03402	0.79	-0.9
3,572,007	-		CCNA_03402	0.79	-0.3
3,572,007	-		CCNA_03402	0.79	-0.6
3,572,007	-		CCNA_03402	0.79	-0.6
3,572,007	-		CCNA_03402	0.79	+1.6
3,572,007	-		CCNA_03402	0.79	-0.4
3,572,007	-		CCNA_03402	0.79	-1.2
3,572,007	-		CCNA_03402	0.79	+0.0
3,572,007	-		CCNA_03402	0.79	-0.8
3,572,007	-		CCNA_03402	0.79	+0.1
3,572,007	-		CCNA_03402	0.79	+0.3
3,572,007	-		CCNA_03402	0.79	+0.5
3,572,012	+		CCNA_03402	0.80	+0.6
3,572,013	-		CCNA_03402	0.80	-0.4
3,572,014	-		CCNA_03402	0.80	+0.6
3,572,014	-		CCNA_03402	0.80	+0.7
3,572,044	+		CCNA_03402	0.83	+2.0
3,572,046	-		CCNA_03402	0.83	-0.0
3,572,064	-		CCNA_03402	0.85	+0.8