Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02154

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
2,309,163	+				+0.7
2,309,191	-				+1.1
2,309,210	+				-0.1
2,309,212	+				+2.7
2,309,220	-				+0.4
2,309,228	-				-0.2
2,309,260	+				-2.0
2,309,268	-				+3.4
2,309,285	-				+0.7
2,309,289	+				-1.0
2,309,297	-		CCNA_02153	0.10	-1.5
2,309,315	-		CCNA_02153	0.12	+0.6
2,309,315	-		CCNA_02153	0.12	-0.5
2,309,323	+		CCNA_02153	0.13	-1.1
2,309,326	-		CCNA_02153	0.13	-1.1
2,309,356	+		CCNA_02153	0.17	+0.1
2,309,364	-		CCNA_02153	0.17	-1.2
2,309,422	+		CCNA_02153	0.24	-1.5
2,309,444	-		CCNA_02153	0.26	+0.3
2,309,535	-		CCNA_02153	0.36	-2.9
2,309,603	-		CCNA_02153	0.43	+0.4
2,309,610	+		CCNA_02153	0.44	+0.1
2,309,666	+		CCNA_02153	0.50	+0.7
2,309,666	+		CCNA_02153	0.50	-0.5
2,309,673	+		CCNA_02153	0.51	-0.4
2,309,673	+		CCNA_02153	0.51	-1.8
2,309,679	-		CCNA_02153	0.52	-1.2
2,309,681	-		CCNA_02153	0.52	-0.1
2,309,729	-		CCNA_02153	0.57	+1.1
2,309,734	-		CCNA_02153	0.58	-0.5
2,309,772	+		CCNA_02153	0.62	+1.1
2,309,788	+		CCNA_02153	0.63	-0.3
2,309,798	-		CCNA_02153	0.64	+0.3
2,309,867	+		CCNA_02153	0.72	+0.4
2,309,937	-		CCNA_02153	0.80	-0.3
2,309,960	-		CCNA_02153	0.82	-1.5
2,309,965	-		CCNA_02153	0.83	-0.2
2,309,970	+		CCNA_02153	0.83	+0.1
2,309,990	+		CCNA_02153	0.85	-0.6
2,310,002	+		CCNA_02153	0.87	-0.3
2,310,095	+				+1.7
2,310,103	-				-0.3
2,310,131	+				-1.6
2,310,131	+				-0.3
2,310,131	+				-0.3
2,310,131	+				-0.3
2,310,131	+				-0.3
2,310,131	+				-0.2
2,310,131	+				+0.7
2,310,131	+				+0.1
2,310,131	+				+1.9
2,310,131	+				+0.7
2,310,131	+				+0.4
2,310,131	+				+2.7
2,310,131	+				+0.1
2,310,139	-				+1.1
2,310,139	-				+1.7
2,310,139	-				+0.7
2,310,139	-				+0.5
2,310,139	-				+1.1
2,310,139	-				-0.1
2,310,139	-				-1.4
2,310,139	-				-0.5
2,310,139	-				-2.4
2,310,139	-				-0.2
2,310,139	-				+0.9
2,310,139	-				-2.5
2,310,139	-				+0.1
2,310,139	-				-0.5
2,310,139	-				-0.6
2,310,139	-				-1.3
2,310,139	-				-0.5
2,310,139	-				+0.5
2,310,139	-				+0.7
2,310,139	-				-0.4
2,310,139	-				-1.1
2,310,139	-				-1.3
2,310,139	-				+0.4
2,310,163	-				-0.6
2,310,182	+				-0.6
2,310,205	-		CCNA_02154	0.12	-0.2
2,310,207	-		CCNA_02154	0.12	+0.2
2,310,215	-		CCNA_02154	0.14	+0.1
2,310,230	-		CCNA_02154	0.17	+1.1
2,310,242	-		CCNA_02154	0.19	-0.2
2,310,249	-		CCNA_02154	0.20	-0.5
2,310,251	+				+2.7
2,310,259	-		CCNA_02154	0.22	-0.5
2,310,277	+		CCNA_02154	0.25	-0.6
2,310,284	+		CCNA_02154	0.27	+0.6
2,310,298	+		CCNA_02154	0.29	-0.9
2,310,326	-		CCNA_02154	0.34	-0.1
2,310,326	-		CCNA_02154	0.34	+0.1
2,310,340	-		CCNA_02154	0.37	+1.1
2,310,392	-		CCNA_02154	0.47	+0.1
2,310,419	+		CCNA_02154	0.52	+1.4
2,310,426	+		CCNA_02154	0.53	+1.1
2,310,487	+		CCNA_02154	0.64	+2.1
2,310,487	+		CCNA_02154	0.64	+0.4
2,310,505	-		CCNA_02154	0.68	-1.2
2,310,507	+		CCNA_02154	0.68	+1.7
2,310,507	+		CCNA_02154	0.68	-1.1
2,310,515	-		CCNA_02154	0.70	+0.4
2,310,559	+		CCNA_02154	0.78	-1.1
2,310,568	+		CCNA_02154	0.80	-0.1
2,310,569	+		CCNA_02154	0.80	+0.3
2,310,594	+		CCNA_02154	0.84	-0.9
2,310,655	+				+1.1
2,310,681	+				+0.4
2,310,681	+				+0.1
2,310,699	+				-0.9
2,310,714	+				-0.2
2,310,722	-				-0.6
2,310,728	+				-1.2
2,310,728	+				-0.7
2,310,733	+				-0.8
2,310,736	-				-1.9
2,310,736	-				-0.4
2,310,736	-				-0.6
2,310,770	+				+1.1
2,310,770	+				+0.7
2,310,873	+				-0.8
2,310,878	+				-0.1
2,310,895	+				-1.2
2,310,903	-				-0.1
2,310,922	-				+1.0
2,310,922	-				-0.3
2,310,937	-				-0.6
2,310,937	-				+0.4
2,310,992	-		CCNA_02155	0.12	+0.2
2,311,014	-		CCNA_02155	0.14	+0.1
2,311,021	+		CCNA_02155	0.15	-0.9
2,311,047	+		CCNA_02155	0.17	+0.7
2,311,048	-		CCNA_02155	0.17	-0.3
2,311,056	-		CCNA_02155	0.18	-0.6
2,311,066	-		CCNA_02155	0.19	-1.2
2,311,105	-		CCNA_02155	0.22	+1.1
2,311,147	-		CCNA_02155	0.26	+0.1
2,311,152	+		CCNA_02155	0.26	+0.1
2,311,175	+		CCNA_02155	0.28	+0.4
2,311,183	+		CCNA_02155	0.29	+0.2
2,311,191	-		CCNA_02155	0.29	+0.1
2,311,260	-		CCNA_02155	0.35	+0.7
2,311,260	-		CCNA_02155	0.35	-0.5
2,311,277	+		CCNA_02155	0.37	+2.1
2,311,283	+		CCNA_02155	0.37	-0.4
2,311,283	+		CCNA_02155	0.37	+1.1
2,311,291	-		CCNA_02155	0.38	+0.7
2,311,302	+		CCNA_02155	0.39	-0.5
2,311,307	+		CCNA_02155	0.39	-1.0
2,311,307	+		CCNA_02155	0.39	-1.0
2,311,307	+		CCNA_02155	0.39	-0.9
2,311,315	-		CCNA_02155	0.40	+2.7
2,311,330	-		CCNA_02155	0.41	-0.6
2,311,383	-		CCNA_02155	0.46	+0.1
2,311,397	+		CCNA_02155	0.47	+2.7
2,311,397	+		CCNA_02155	0.47	+2.1
2,311,397	+		CCNA_02155	0.47	-0.0
2,311,405	-		CCNA_02155	0.47	-0.5
2,311,421	+		CCNA_02155	0.49	+1.1
2,311,473	+		CCNA_02155	0.53	+1.7
2,311,498	+		CCNA_02155	0.55	-0.5
2,311,519	-		CCNA_02155	0.57	-0.8
2,311,519	-		CCNA_02155	0.57	+1.7
2,311,594	+		CCNA_02155	0.63	+2.7