Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01835

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
1,966,541	-		CCNA_01834	0.61	+0.2
1,966,564	-		CCNA_01834	0.62	-0.0
1,966,584	+		CCNA_01834	0.62	-1.1
1,966,584	+		CCNA_01834	0.62	-0.2
1,966,592	-		CCNA_01834	0.63	-0.2
1,966,605	-		CCNA_01834	0.63	+0.5
1,966,605	-		CCNA_01834	0.63	-1.0
1,966,637	-		CCNA_01834	0.65	+1.3
1,966,676	+		CCNA_01834	0.66	-0.2
1,966,720	-		CCNA_01834	0.68	+1.3
1,966,739	-		CCNA_01834	0.69	-1.2
1,966,797	+		CCNA_01834	0.71	+0.9
1,966,805	-		CCNA_01834	0.71	-0.0
1,966,815	-		CCNA_01834	0.72	-0.5
1,966,847	-		CCNA_01834	0.73	-0.7
1,966,850	-		CCNA_01834	0.73	+1.0
1,966,852	-		CCNA_01834	0.73	+1.8
1,966,906	-		CCNA_01834	0.75	+0.1
1,966,908	+		CCNA_01834	0.75	-0.8
1,966,947	+		CCNA_01834	0.77	+1.5
1,967,011	+		CCNA_01834	0.79	-2.0
1,967,026	+		CCNA_01834	0.80	+1.2
1,967,034	-		CCNA_01834	0.80	-1.0
1,967,034	-		CCNA_01834	0.80	-0.2
1,967,058	-		CCNA_01834	0.81	+0.5
1,967,058	-		CCNA_01834	0.81	+0.7
1,967,058	-		CCNA_01834	0.81	-1.0
1,967,058	-		CCNA_01834	0.81	-0.3
1,967,075	+		CCNA_01834	0.82	+0.8
1,967,083	-		CCNA_01834	0.82	-0.7
1,967,130	-		CCNA_01834	0.84	-1.0
1,967,158	+		CCNA_01834	0.85	-1.0
1,967,184	-		CCNA_01834	0.86	-1.5
1,967,241	+		CCNA_01834	0.88	-0.8
1,967,299	-				+1.1
1,967,380	+				-0.2
1,967,441	+				+0.2
1,967,449	-				+2.8
1,967,451	+				+0.2
1,967,454	-				-0.2
1,967,511	+				+3.1
1,967,511	+				+0.8
1,967,511	+				+1.2
1,967,511	+				-0.0
1,967,547	+				+1.1
1,967,584	+				-1.1
1,967,587	-				-0.7
1,967,642	+		CCNA_01835	0.17	+1.0
1,967,644	-		CCNA_01835	0.17	+0.1
1,967,673	-		CCNA_01835	0.21	-0.0
1,967,713	-		CCNA_01835	0.27	+0.8
1,967,730	+		CCNA_01835	0.29	+2.8
1,967,735	+		CCNA_01835	0.30	-1.5
1,967,735	+		CCNA_01835	0.30	-1.7
1,967,740	+		CCNA_01835	0.31	+0.2
1,967,742	+		CCNA_01835	0.31	-0.0
1,967,743	-		CCNA_01835	0.31	+0.6
1,967,743	-		CCNA_01835	0.31	+0.5
1,967,743	-		CCNA_01835	0.31	-1.8
1,967,743	-		CCNA_01835	0.31	-1.0
1,967,760	+		CCNA_01835	0.34	-0.8
1,967,768	-		CCNA_01835	0.35	-1.3
1,967,812	+		CCNA_01835	0.41	+1.2
1,967,817	+		CCNA_01835	0.42	-0.7
1,967,879	-		CCNA_01835	0.51	-0.6
1,967,890	-		CCNA_01835	0.53	-1.2
1,967,897	-		CCNA_01835	0.54	-0.2
1,967,924	+		CCNA_01835	0.58	+0.3
1,967,932	-		CCNA_01835	0.59	-1.5
1,967,953	-		CCNA_01835	0.62	+1.2
1,967,978	+		CCNA_01835	0.66	-0.4
1,968,015	-		CCNA_01835	0.71	-0.3
1,968,031	-		CCNA_01835	0.73	-0.7
1,968,102	-		CCNA_01835	0.84	-2.0
1,968,120	-		CCNA_01835	0.86	-0.4
1,968,157	+				+1.8
1,968,161	-				+0.8
1,968,166	-				+0.8
1,968,166	-				-0.9
1,968,242	-				-0.0
1,968,261	-				-0.0
1,968,271	-				-0.5
1,968,274	+				+0.1
1,968,362	+		CCNA_01836	0.14	-0.2
1,968,434	+		CCNA_01836	0.26	-1.3
1,968,436	+		CCNA_01836	0.26	-0.1
1,968,436	+		CCNA_01836	0.26	+2.2
1,968,444	-		CCNA_01836	0.27	+0.2
1,968,444	-		CCNA_01836	0.27	-0.0
1,968,444	-		CCNA_01836	0.27	+0.2
1,968,564	-				+2.8
1,968,613	+		CCNA_01836	0.54	-1.3
1,968,679	-		CCNA_01836	0.64	+1.2
1,968,801	-		CCNA_01836	0.84	+1.2
1,968,855	-				-0.0
1,968,926	-				-0.0
1,968,982	-				+0.2
1,968,982	-				+0.2
1,969,010	+				+0.2
1,969,068	-				+1.8
1,969,068	-				+1.2
1,969,093	-				+0.8
1,969,159	+		CCNA_01837	0.10	-0.6
1,969,208	-		CCNA_01837	0.15	+3.2