Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01665

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
1,785,482	-		CCNA_01664	0.54	+0.5
1,785,529	-		CCNA_01664	0.56	+1.8
1,785,565	+		CCNA_01664	0.58	-0.7
1,785,605	-		CCNA_01664	0.60	+0.5
1,785,610	+		CCNA_01664	0.60	+1.8
1,785,619	-		CCNA_01664	0.60	+1.8
1,785,619	-		CCNA_01664	0.60	+0.8
1,785,619	-		CCNA_01664	0.60	+1.8
1,785,696	+		CCNA_01664	0.64	-0.1
1,785,708	+		CCNA_01664	0.65	-0.0
1,785,718	+		CCNA_01664	0.65	+0.8
1,785,726	-		CCNA_01664	0.66	+0.1
1,785,726	-		CCNA_01664	0.66	-0.0
1,785,739	-		CCNA_01664	0.66	-0.0
1,785,741	+		CCNA_01664	0.66	-1.3
1,785,749	-		CCNA_01664	0.67	-0.9
1,785,764	-		CCNA_01664	0.67	-0.2
1,785,771	+		CCNA_01664	0.68	-2.4
1,785,771	+		CCNA_01664	0.68	-0.0
1,785,771	+		CCNA_01664	0.68	-0.5
1,785,776	+		CCNA_01664	0.68	-1.2
1,785,776	+		CCNA_01664	0.68	-0.2
1,785,776	+		CCNA_01664	0.68	+1.2
1,785,776	+		CCNA_01664	0.68	-1.3
1,785,776	+		CCNA_01664	0.68	+0.8
1,785,784	-		CCNA_01664	0.68	+1.8
1,785,784	-		CCNA_01664	0.68	+0.8
1,785,784	-		CCNA_01664	0.68	-0.2
1,785,788	+		CCNA_01664	0.69	-1.5
1,785,796	-		CCNA_01664	0.69	-0.9
1,785,796	-		CCNA_01664	0.69	+2.8
1,785,882	+		CCNA_01664	0.73	-0.8
1,785,900	-		CCNA_01664	0.74	+1.2
1,785,905	-		CCNA_01664	0.74	-0.2
1,785,907	+		CCNA_01664	0.74	-0.0
1,785,915	-		CCNA_01664	0.75	-1.3
1,785,915	-		CCNA_01664	0.75	-0.2
1,785,915	-		CCNA_01664	0.75	+2.8
1,785,964	+		CCNA_01664	0.77	+1.2
1,785,986	+		CCNA_01664	0.78	-2.6
1,786,106	+		CCNA_01664	0.84	+0.8
1,786,114	-		CCNA_01664	0.84	-0.7
1,786,114	-		CCNA_01664	0.84	+1.2
1,786,139	+		CCNA_01664	0.86	+0.6
1,786,139	+		CCNA_01664	0.86	+1.2
1,786,147	-		CCNA_01664	0.86	+2.4
1,786,219	-		CCNA_01664	0.89	+0.8
1,786,229	-		CCNA_01664	0.90	+2.8
1,786,269	+				+0.2
1,786,288	+				+1.5
1,786,297	-				-0.2
1,786,297	-				+0.3
1,786,307	-				+1.2
1,786,341	-				-0.7
1,786,344	+				-0.4
1,786,360	-				+0.2
1,786,397	-				-0.4
1,786,426	-				-0.7
1,786,432	-				-0.4
1,786,461	-				+1.2
1,786,467	+				-0.8
1,786,525	+		CCNA_01665	0.10	-0.8
1,786,533	-		CCNA_01665	0.12	-0.6
1,786,550	-		CCNA_01665	0.15	-0.4
1,786,574	-		CCNA_01665	0.19	-0.4
1,786,620	+		CCNA_01665	0.26	-1.9
1,786,625	+		CCNA_01665	0.27	-0.5
1,786,639	+		CCNA_01665	0.30	+1.8
1,786,659	+		CCNA_01665	0.33	-1.3
1,786,668	-		CCNA_01665	0.35	-0.0
1,786,672	+		CCNA_01665	0.35	+0.8
1,786,721	+		CCNA_01665	0.43	-0.5
1,786,756	+		CCNA_01665	0.49	-0.1
1,786,756	+		CCNA_01665	0.49	-2.5
1,786,820	+		CCNA_01665	0.60	-0.3
1,786,983	+		CCNA_01665	0.88	+1.5
1,786,990	+		CCNA_01665	0.89	-0.2
1,786,997	+				-0.5
1,786,997	+				-0.7
1,786,997	+				+0.1
1,787,005	-				-0.7
1,787,084	+				-0.2
1,787,103	-				+0.8
1,787,164	+				-0.7
1,787,191	+				-1.4
1,787,199	+				-0.9
1,787,287	-				-0.0
1,787,348	+		CCNA_01666	0.11	+1.8
1,787,352	-		CCNA_01666	0.11	+0.6
1,787,386	+		CCNA_01666	0.12	-0.7
1,787,405	-		CCNA_01666	0.13	+0.5
1,787,446	-		CCNA_01666	0.15	-0.5
1,787,469	+		CCNA_01666	0.15	-1.2
1,787,477	-		CCNA_01666	0.16	-0.9
1,787,513	+		CCNA_01666	0.17	-0.4
1,787,554	+		CCNA_01666	0.19	+0.3
1,787,554	+		CCNA_01666	0.19	+1.2
1,787,559	+		CCNA_01666	0.19	-0.3
1,787,562	-		CCNA_01666	0.19	+2.8
1,787,571	+		CCNA_01666	0.19	+2.2
1,787,574	-		CCNA_01666	0.19	-0.5
1,787,579	-		CCNA_01666	0.20	-2.2
1,787,595	+		CCNA_01666	0.20	+0.8
1,787,660	-		CCNA_01666	0.23	+0.1
1,787,692	+		CCNA_01666	0.24	-1.7
1,787,700	-		CCNA_01666	0.24	-0.2
1,787,708	-		CCNA_01666	0.24	-1.2
1,787,722	+		CCNA_01666	0.25	+0.5
1,787,727	+		CCNA_01666	0.25	-0.1
1,787,727	+		CCNA_01666	0.25	+0.9
1,787,737	+		CCNA_01666	0.25	-0.7
1,787,745	-		CCNA_01666	0.26	-0.0
1,787,745	-		CCNA_01666	0.26	-1.1
1,787,745	-		CCNA_01666	0.26	-1.0
1,787,793	+		CCNA_01666	0.28	+1.1
1,787,793	+		CCNA_01666	0.28	-0.5
1,787,801	-		CCNA_01666	0.28	-1.5
1,787,801	-		CCNA_01666	0.28	-1.2
1,787,826	+		CCNA_01666	0.29	-1.0
1,787,864	-		CCNA_01666	0.30	+0.8
1,787,867	+		CCNA_01666	0.30	-0.7
1,787,912	+		CCNA_01666	0.32	-1.0
1,787,954	-		CCNA_01666	0.34	-0.2
1,787,967	+		CCNA_01666	0.34	-0.7
1,787,974	+		CCNA_01666	0.34	-0.6
1,788,016	-		CCNA_01666	0.36	-0.9
1,788,023	-		CCNA_01666	0.36	+0.5
1,788,051	-		CCNA_01666	0.37	+1.8
1,788,051	-		CCNA_01666	0.37	-0.0
1,788,051	-		CCNA_01666	0.37	-0.4