Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01656

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
1,776,159	+		CCNA_01654	0.69	+0.4
1,776,194	+		CCNA_01654	0.74	+0.9
1,776,293	+		CCNA_01654	0.85	+0.7
1,776,294	+		CCNA_01654	0.85	+0.3
1,776,302	-		CCNA_01654	0.86	-1.0
1,776,382	+				-0.9
1,776,457	+				+0.4
1,776,465	-				-0.8
1,776,507	-				+0.5
1,776,564	+		CCNA_01655	0.12	+0.1
1,776,572	-		CCNA_01655	0.13	-0.2
1,776,574	-		CCNA_01655	0.14	+2.1
1,776,647	+		CCNA_01655	0.29	+0.4
1,776,647	+		CCNA_01655	0.29	-0.5
1,776,655	-		CCNA_01655	0.31	+0.2
1,776,662	+		CCNA_01655	0.33	+0.6
1,776,737	+		CCNA_01655	0.49	+1.0
1,776,817	+		CCNA_01655	0.66	+0.1
1,776,856	+		CCNA_01655	0.74	+0.8
1,776,856	+		CCNA_01655	0.74	+1.1
1,776,864	-		CCNA_01655	0.76	-0.0
1,776,864	-		CCNA_01655	0.76	+0.8
1,776,880	-		CCNA_01655	0.79	-1.6
1,776,910	+		CCNA_01655	0.86	+0.8
1,776,910	+		CCNA_01655	0.86	+1.5
1,776,910	+		CCNA_01655	0.86	+0.9
1,776,910	+		CCNA_01655	0.86	+2.1
1,776,910	+		CCNA_01655	0.86	+0.4
1,776,910	+		CCNA_01655	0.86	+0.8
1,776,910	+		CCNA_01655	0.86	+0.8
1,776,916	-		CCNA_01655	0.87	+0.5
1,776,945	-				-0.5
1,777,054	+				+0.6
1,777,054	+				+0.4
1,777,068	+				-0.2
1,777,116	+				-0.5
1,777,116	+				+0.4
1,777,124	-				-1.9
1,777,200	+				-0.9
1,777,242	-		CCNA_01656	0.10	-0.6
1,777,265	-		CCNA_01656	0.12	+0.5
1,777,334	+		CCNA_01656	0.20	-0.8
1,777,442	+		CCNA_01656	0.31	-1.1
1,777,442	+		CCNA_01656	0.31	-0.9
1,777,451	-		CCNA_01656	0.31	-0.6
1,777,480	+		CCNA_01656	0.34	+1.2
1,777,488	+		CCNA_01656	0.35	-0.9
1,777,494	-		CCNA_01656	0.36	+0.5
1,777,494	-		CCNA_01656	0.36	-0.5
1,777,495	+		CCNA_01656	0.36	+0.5
1,777,561	-		CCNA_01656	0.43	-1.6
1,777,561	-		CCNA_01656	0.43	-1.5
1,777,562	+		CCNA_01656	0.43	-1.7
1,777,616	-		CCNA_01656	0.48	-1.8
1,777,616	-		CCNA_01656	0.48	-1.1
1,777,710	-		CCNA_01656	0.58	-1.2
1,777,736	+		CCNA_01656	0.61	+1.2
1,777,760	-		CCNA_01656	0.63	+0.5
1,777,780	+		CCNA_01656	0.65	-1.6
1,777,780	+		CCNA_01656	0.65	+1.8
1,777,788	+		CCNA_01656	0.66	-0.6
1,777,795	+		CCNA_01656	0.67	+1.1
1,777,842	+		CCNA_01656	0.71	-0.7
1,777,870	-		CCNA_01656	0.74	+0.5
1,777,885	-		CCNA_01656	0.76	-0.3
1,777,941	+		CCNA_01656	0.82	+0.5
1,777,949	+		CCNA_01656	0.82	-1.6
1,777,950	-		CCNA_01656	0.83	+1.2
1,777,974	+		CCNA_01656	0.85	-0.7
1,778,034	+				-0.0
1,778,042	-				+1.2
1,778,123	-				-0.0
1,778,134	-				+0.4
1,778,134	-				-0.7
1,778,146	-				-1.4
1,778,185	+				+0.2
1,778,188	-				-0.8
1,778,236	-		CCNA_01657	0.11	-0.2
1,778,236	-		CCNA_01657	0.11	-0.0
1,778,236	-		CCNA_01657	0.11	-0.2
1,778,241	-		CCNA_01657	0.12	-0.3
1,778,323	+		CCNA_01657	0.25	+1.1
1,778,367	+		CCNA_01657	0.32	-0.2
1,778,386	+		CCNA_01657	0.35	-0.4
1,778,386	+		CCNA_01657	0.35	+1.2
1,778,444	-		CCNA_01657	0.44	+0.2
1,778,498	+		CCNA_01657	0.52	-0.2
1,778,506	-		CCNA_01657	0.53	-1.2
1,778,511	+		CCNA_01657	0.54	+1.2
1,778,713	-		CCNA_01657	0.85	+0.8
1,778,790	-				+1.8
1,778,803	+				+0.2
1,778,822	+				+0.8
1,778,824	+				+0.1
1,778,853	+				+0.7
1,778,853	+				+1.5
1,778,853	+				-3.2
1,778,861	-				-0.0
1,778,862	-				+0.5
1,778,877	-				+2.8
1,778,921	+				+0.5
1,778,992	+				-0.8
1,778,992	+				+1.8
1,778,995	-				+0.5
1,778,997	+				+1.0
1,779,005	-		CCNA_01658	0.10	+1.8