Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01334

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
1,445,918	+				+1.1
1,445,960	+				+0.9
1,446,001	+				+1.0
1,446,044	-				-1.4
1,446,046	-				+0.4
1,446,046	-				-0.0
1,446,046	-				-0.3
1,446,046	-				-0.3
1,446,076	-				-0.4
1,446,076	-				+2.8
1,446,116	+				+0.5
1,446,174	-				-0.2
1,446,191	+				-0.2
1,446,197	+				-0.2
1,446,234	-				+0.3
1,446,234	-				-0.1
1,446,247	+				+0.8
1,446,348	+				+1.8
1,446,353	-				+0.4
1,446,412	-		CCNA_01333	0.20	+2.8
1,446,495	+		CCNA_01333	0.41	-0.7
1,446,577	+		CCNA_01333	0.62	+1.2
1,446,577	+		CCNA_01333	0.62	+1.7
1,446,577	+		CCNA_01333	0.62	-0.9
1,446,649	-		CCNA_01333	0.81	+0.1
1,446,649	-		CCNA_01333	0.81	-0.9
1,446,649	-		CCNA_01333	0.81	+1.2
1,446,675	+		CCNA_01333	0.87	+0.5
1,446,714	+				+0.3
1,446,769	-				+0.3
1,446,769	-				+1.2
1,446,813	-				-1.1
1,446,861	-				+0.2
1,446,862	-				-1.3
1,446,869	+				+2.8
1,446,887	-				+2.8
1,446,888	-				+1.8
1,447,028	-		CCNA_01334	0.16	-1.1
1,447,037	+		CCNA_01334	0.18	-2.0
1,447,070	+		CCNA_01334	0.22	+2.8
1,447,092	-		CCNA_01334	0.24	-0.9
1,447,097	-		CCNA_01334	0.25	+0.3
1,447,116	+		CCNA_01334	0.27	-0.4
1,447,119	-		CCNA_01334	0.27	-1.0
1,447,124	-		CCNA_01334	0.28	-2.9
1,447,129	-		CCNA_01334	0.29	-1.8
1,447,133	-		CCNA_01334	0.29	-1.9
1,447,150	-		CCNA_01334	0.31	-0.5
1,447,195	-		CCNA_01334	0.37	-0.0
1,447,215	+		CCNA_01334	0.39	-1.3
1,447,223	-		CCNA_01334	0.40	-0.4
1,447,242	-		CCNA_01334	0.42	+0.9
1,447,305	+		CCNA_01334	0.50	+1.0
1,447,330	-		CCNA_01334	0.53	-1.0
1,447,348	-		CCNA_01334	0.55	-0.7
1,447,360	+		CCNA_01334	0.56	-1.0
1,447,360	+		CCNA_01334	0.56	-0.0
1,447,360	+		CCNA_01334	0.56	-0.0
1,447,360	+		CCNA_01334	0.56	-1.1
1,447,360	+		CCNA_01334	0.56	-2.3
1,447,360	+		CCNA_01334	0.56	+0.5
1,447,360	+		CCNA_01334	0.56	-1.4
1,447,360	+		CCNA_01334	0.56	+0.2
1,447,368	-		CCNA_01334	0.57	+0.8
1,447,368	-		CCNA_01334	0.57	+0.2
1,447,368	-		CCNA_01334	0.57	-0.4
1,447,368	-		CCNA_01334	0.57	-0.8
1,447,368	-		CCNA_01334	0.57	-1.2
1,447,368	-		CCNA_01334	0.57	+0.8
1,447,368	-		CCNA_01334	0.57	-1.3
1,447,368	-		CCNA_01334	0.57	-0.5
1,447,368	-		CCNA_01334	0.57	+0.7
1,447,368	-				+2.8
1,447,381	+		CCNA_01334	0.59	-0.2
1,447,391	+		CCNA_01334	0.60	+0.2
1,447,412	+		CCNA_01334	0.63	-0.0
1,447,417	+		CCNA_01334	0.63	-1.1
1,447,424	-		CCNA_01334	0.64	-1.9
1,447,444	+		CCNA_01334	0.67	+0.1
1,447,489	+		CCNA_01334	0.72	+1.2
1,447,489	+		CCNA_01334	0.72	-0.0
1,447,521	+		CCNA_01334	0.76	-0.3
1,447,527	-		CCNA_01334	0.77	-0.3
1,447,527	-		CCNA_01334	0.77	+0.5
1,447,533	+		CCNA_01334	0.77	-1.6
1,447,533	+		CCNA_01334	0.77	-0.7
1,447,539	-		CCNA_01334	0.78	-2.1
1,447,553	+		CCNA_01334	0.80	+1.4
1,447,599	+		CCNA_01334	0.85	-0.8
1,447,612	-		CCNA_01334	0.87	-0.7
1,447,622	+		CCNA_01334	0.88	-0.9
1,447,629	+		CCNA_01334	0.89	-1.1
1,447,630	-		CCNA_01334	0.89	+0.5
1,447,652	+				-1.4
1,447,654	+				-0.7
1,447,662	-				-0.8
1,447,662	-				-1.5
1,447,726	-				-1.1
1,447,838	-		CCNA_01335	0.13	-0.2
1,447,885	+				+2.8
1,447,888	-		CCNA_01335	0.18	-0.8
1,447,888	-		CCNA_01335	0.18	-0.0
1,447,888	-		CCNA_01335	0.18	+0.2
1,447,893	-		CCNA_01335	0.19	-0.8
1,447,927	-		CCNA_01335	0.22	+1.8
1,447,941	-		CCNA_01335	0.24	-1.2
1,447,960	-		CCNA_01335	0.26	+1.2
1,447,998	-		CCNA_01335	0.30	+0.2
1,448,010	+		CCNA_01335	0.31	+1.8
1,448,010	+		CCNA_01335	0.31	+1.2
1,448,055	+		CCNA_01335	0.36	+0.2
1,448,063	-		CCNA_01335	0.37	+0.1
1,448,063	-		CCNA_01335	0.37	+0.6
1,448,063	-		CCNA_01335	0.37	-0.5
1,448,065	+		CCNA_01335	0.37	+1.5
1,448,080	-		CCNA_01335	0.39	-0.2
1,448,100	+		CCNA_01335	0.41	-0.7
1,448,108	-		CCNA_01335	0.42	-0.9
1,448,163	-		CCNA_01335	0.48	-0.5
1,448,163	-		CCNA_01335	0.48	-0.9
1,448,228	+		CCNA_01335	0.55	+8.6
1,448,229	-		CCNA_01335	0.55	+0.8
1,448,229	-		CCNA_01335	0.55	+2.8
1,448,233	+		CCNA_01335	0.56	-2.2
1,448,233	+		CCNA_01335	0.56	-1.7
1,448,233	+		CCNA_01335	0.56	+0.2
1,448,233	+		CCNA_01335	0.56	+2.8
1,448,233	+		CCNA_01335	0.56	+0.2
1,448,233	+		CCNA_01335	0.56	-0.2
1,448,233	+		CCNA_01335	0.56	-1.3
1,448,233	+		CCNA_01335	0.56	-1.2
1,448,241	-		CCNA_01335	0.57	-1.2
1,448,241	-		CCNA_01335	0.57	+0.3
1,448,241	-		CCNA_01335	0.57	-0.0
1,448,241	-		CCNA_01335	0.57	-1.6
1,448,241	-		CCNA_01335	0.57	+0.8
1,448,241	-		CCNA_01335	0.57	-0.8
1,448,278	+		CCNA_01335	0.61	+0.2
1,448,287	-		CCNA_01335	0.62	-1.5
1,448,296	+		CCNA_01335	0.63	-1.0
1,448,373	-		CCNA_01335	0.71	-1.1
1,448,373	-		CCNA_01335	0.71	-0.7
1,448,391	+		CCNA_01335	0.73	-0.8
1,448,399	-		CCNA_01335	0.74	+0.4
1,448,409	+		CCNA_01335	0.75	-0.3
1,448,417	-		CCNA_01335	0.76	-0.2
1,448,422	-		CCNA_01335	0.76	-0.1
1,448,455	-		CCNA_01335	0.80	-0.8
1,448,482	+		CCNA_01335	0.83	-1.2
1,448,482	+		CCNA_01335	0.83	-1.8
1,448,490	-		CCNA_01335	0.84	-0.5
1,448,490	-		CCNA_01335	0.84	+0.7
1,448,501	-		CCNA_01335	0.85	+0.6
1,448,511	-		CCNA_01335	0.86	+1.2
1,448,612	+				-0.0
1,448,653	-				+0.3
1,448,681	+				-0.5
1,448,681	+				-0.4
1,448,717	-				-0.7
1,448,718	-				-1.5
1,448,718	-				-0.2