Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01224

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
1,349,770	-		CCNA_01223	0.44	-1.6
1,349,770	-		CCNA_01223	0.44	-1.9
1,349,807	+		CCNA_01223	0.47	+0.4
1,349,807	+		CCNA_01223	0.47	+0.3
1,349,812	+		CCNA_01223	0.47	+0.8
1,349,815	-		CCNA_01223	0.47	-0.2
1,349,815	-		CCNA_01223	0.47	-2.2
1,349,815	-		CCNA_01223	0.47	-1.3
1,349,820	-		CCNA_01223	0.47	-0.6
1,349,914	+		CCNA_01223	0.53	-2.0
1,349,916	+		CCNA_01223	0.53	+0.2
1,349,935	+		CCNA_01223	0.54	-0.8
1,350,037	+		CCNA_01223	0.60	+1.2
1,350,039	-		CCNA_01223	0.60	-0.9
1,350,071	+		CCNA_01223	0.62	-0.0
1,350,078	+		CCNA_01223	0.62	-0.0
1,350,086	-		CCNA_01223	0.63	-1.3
1,350,093	-		CCNA_01223	0.63	-2.2
1,350,122	-		CCNA_01223	0.65	-0.2
1,350,157	+		CCNA_01223	0.67	-0.7
1,350,189	+		CCNA_01223	0.69	+2.8
1,350,218	-		CCNA_01223	0.71	+0.4
1,350,223	-		CCNA_01223	0.71	+0.2
1,350,225	+		CCNA_01223	0.71	+0.8
1,350,266	+		CCNA_01223	0.73	-0.9
1,350,266	+		CCNA_01223	0.73	-0.2
1,350,274	-		CCNA_01223	0.74	+1.2
1,350,274	-		CCNA_01223	0.74	+0.4
1,350,274	-		CCNA_01223	0.74	-1.5
1,350,324	+		CCNA_01223	0.77	+0.8
1,350,330	+		CCNA_01223	0.77	+1.8
1,350,331	-		CCNA_01223	0.77	-0.5
1,350,335	+		CCNA_01223	0.77	+0.8
1,350,363	-		CCNA_01223	0.79	-0.4
1,350,363	-		CCNA_01223	0.79	-2.5
1,350,367	+		CCNA_01223	0.79	+0.2
1,350,380	-		CCNA_01223	0.80	-1.0
1,350,406	-		CCNA_01223	0.81	-1.1
1,350,451	-		CCNA_01223	0.84	-0.7
1,350,482	-		CCNA_01223	0.86	-1.3
1,350,504	+		CCNA_01223	0.87	+1.8
1,350,505	-		CCNA_01223	0.87	-1.4
1,350,559	+				-3.2
1,350,559	+				-1.1
1,350,569	+				-0.2
1,350,572	-				+1.2
1,350,572	-				+0.4
1,350,572	-				-0.0
1,350,577	-				+2.8
1,350,584	-				-0.2
1,350,584	-				+1.0
1,350,600	+				+0.2
1,350,608	-				-2.0
1,350,650	+				-0.0
1,350,734	-				-0.3
1,350,756	-				-0.2
1,350,798	-				+1.4
1,351,125	+		CCNA_01224	0.30	+0.4
1,351,192	-		CCNA_01224	0.35	+1.8
1,351,472	-		CCNA_01224	0.56	+0.8
1,351,639	-		CCNA_01224	0.68	+0.8
1,351,754	-		CCNA_01224	0.77	+1.2
1,351,754	-		CCNA_01224	0.77	+1.2
1,351,754	-		CCNA_01224	0.77	+0.4
1,351,869	-		CCNA_01224	0.86	+1.8
1,351,968	-				+1.8
1,352,037	-				-1.2
1,352,076	-				-0.2
1,352,095	-				-2.0
1,352,145	+				+0.2
1,352,159	-				-0.2
1,352,186	+		CCNA_01225	0.11	+0.2
1,352,194	-		CCNA_01225	0.12	+0.2
1,352,194	-		CCNA_01225	0.12	+0.8
1,352,222	+		CCNA_01225	0.15	+0.2
1,352,222	+		CCNA_01225	0.15	+2.8
1,352,222	+		CCNA_01225	0.15	+2.8
1,352,230	-		CCNA_01225	0.15	-1.3
1,352,230	-		CCNA_01225	0.15	-0.6
1,352,230	-		CCNA_01225	0.15	-0.2
1,352,230	-		CCNA_01225	0.15	-0.8
1,352,238	-		CCNA_01225	0.16	-0.6
1,352,303	+		CCNA_01225	0.22	+1.2
1,352,313	-		CCNA_01225	0.23	-0.0
1,352,381	-		CCNA_01225	0.29	+1.0
1,352,390	+		CCNA_01225	0.30	+0.8
1,352,514	-		CCNA_01225	0.41	-0.8
1,352,542	-		CCNA_01225	0.43	+0.3
1,352,585	-		CCNA_01225	0.47	+0.1
1,352,585	-		CCNA_01225	0.47	+0.4
1,352,594	+		CCNA_01225	0.48	+0.2
1,352,675	+		CCNA_01225	0.55	+2.8
1,352,685	+		CCNA_01225	0.56	-0.5
1,352,693	-		CCNA_01225	0.56	+1.2
1,352,698	-		CCNA_01225	0.57	-0.1
1,352,702	+		CCNA_01225	0.57	+0.2
1,352,734	+		CCNA_01225	0.60	-1.2
1,352,742	-		CCNA_01225	0.61	-2.1
1,352,748	+		CCNA_01225	0.61	-0.7
1,352,756	-		CCNA_01225	0.62	+3.4
1,352,758	+		CCNA_01225	0.62	+1.2
1,352,767	+		CCNA_01225	0.63	+0.8
1,352,776	-		CCNA_01225	0.64	-2.6
1,352,779	+		CCNA_01225	0.64	-1.3
1,352,787	-		CCNA_01225	0.65	-1.3
1,352,817	+		CCNA_01225	0.67	+0.8
1,352,817	+		CCNA_01225	0.67	+0.4
1,352,817	+		CCNA_01225	0.67	-0.4
1,352,817	+		CCNA_01225	0.67	-2.2
1,352,818	-		CCNA_01225	0.67	+0.8
1,352,825	-		CCNA_01225	0.68	-2.2
1,352,825	-		CCNA_01225	0.68	+0.1
1,352,825	-		CCNA_01225	0.68	+0.2
1,352,825	-		CCNA_01225	0.68	+0.4
1,352,825	-		CCNA_01225	0.68	-0.9
1,352,825	-		CCNA_01225	0.68	-1.9
1,352,842	+		CCNA_01225	0.70	-1.9
1,352,850	-		CCNA_01225	0.70	+0.0
1,352,850	-		CCNA_01225	0.70	-1.4
1,352,860	-		CCNA_01225	0.71	+0.2
1,352,868	-		CCNA_01225	0.72	-0.9
1,352,868	-		CCNA_01225	0.72	+0.6
1,352,872	+		CCNA_01225	0.72	-1.3
1,352,877	+		CCNA_01225	0.73	+1.4
1,352,885	-		CCNA_01225	0.73	-0.7
1,352,934	+		CCNA_01225	0.78	-0.9
1,352,979	+		CCNA_01225	0.82	-2.9
1,353,057	-		CCNA_01225	0.89	-1.9
1,353,057	-		CCNA_01225	0.89	+0.3
1,353,057	-		CCNA_01225	0.89	+1.8