Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01153

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
1,255,539	-		CCNA_01151	0.83	+1.7
1,255,589	+		CCNA_01151	0.88	+0.4
1,255,591	+		CCNA_01151	0.89	-0.8
1,255,618	-				+1.7
1,255,641	-				-1.6
1,255,643	-				+0.4
1,255,659	+				-0.4
1,255,659	+				-1.3
1,255,659	+				+0.9
1,255,659	+				-0.7
1,255,666	-				-0.6
1,255,670	+				+0.7
1,255,670	+				+1.7
1,255,710	+				+0.7
1,255,713	-				+1.1
1,255,785	+				-2.5
1,255,785	+				+0.4
1,255,785	+				+0.4
1,255,785	+				-1.8
1,255,797	+		CCNA_01152	0.10	-1.0
1,255,810	-		CCNA_01152	0.12	+0.4
1,255,850	+		CCNA_01152	0.17	-1.1
1,255,888	-		CCNA_01152	0.21	+0.7
1,255,908	-		CCNA_01152	0.24	-0.6
1,255,941	+		CCNA_01152	0.28	+0.9
1,255,947	-		CCNA_01152	0.28	-1.1
1,255,949	-		CCNA_01152	0.29	+0.1
1,255,949	-		CCNA_01152	0.29	-0.6
1,255,961	+		CCNA_01152	0.30	-0.7
1,255,971	+		CCNA_01152	0.31	-1.4
1,255,971	+		CCNA_01152	0.31	+1.7
1,255,979	-		CCNA_01152	0.32	-2.5
1,255,995	+		CCNA_01152	0.34	+1.1
1,256,003	-		CCNA_01152	0.35	+1.7
1,256,009	+		CCNA_01152	0.36	+1.1
1,256,009	+		CCNA_01152	0.36	-0.3
1,256,034	+		CCNA_01152	0.39	+0.1
1,256,034	+		CCNA_01152	0.39	-0.2
1,256,046	+		CCNA_01152	0.40	+0.7
1,256,057	+		CCNA_01152	0.42	-0.9
1,256,091	+		CCNA_01152	0.46	-0.9
1,256,107	-		CCNA_01152	0.48	+0.4
1,256,111	+		CCNA_01152	0.48	+0.6
1,256,155	+		CCNA_01152	0.54	-0.4
1,256,191	-		CCNA_01152	0.58	-1.2
1,256,222	+		CCNA_01152	0.62	-0.5
1,256,239	+		CCNA_01152	0.64	+1.1
1,256,254	+		CCNA_01152	0.66	+2.7
1,256,254	+		CCNA_01152	0.66	-0.1
1,256,262	-		CCNA_01152	0.67	-0.1
1,256,262	-		CCNA_01152	0.67	+0.3
1,256,262	-		CCNA_01152	0.67	-0.3
1,256,281	-		CCNA_01152	0.69	+0.4
1,256,286	-		CCNA_01152	0.70	-0.6
1,256,315	+		CCNA_01152	0.73	-1.0
1,256,323	-		CCNA_01152	0.74	-0.3
1,256,337	+		CCNA_01152	0.76	-1.2
1,256,457	-				+0.7
1,256,520	+				+0.8
1,256,534	+				+0.6
1,256,560	+				+0.7
1,256,580	+				-1.3
1,256,602	-				+0.7
1,256,602	-				-1.3
1,256,627	+				+1.1
1,256,637	+				-0.5
1,256,645	-				-1.6
1,256,645	-				-1.0
1,256,678	+		CCNA_01153	0.11	-0.8
1,256,686	-		CCNA_01153	0.12	+1.1
1,256,690	+		CCNA_01153	0.12	-0.9
1,256,713	+		CCNA_01153	0.14	-1.0
1,256,753	-		CCNA_01153	0.17	+1.7
1,256,767	+		CCNA_01153	0.18	+0.6
1,256,770	-		CCNA_01153	0.18	-0.1
1,256,789	+		CCNA_01153	0.20	-0.4
1,256,806	+		CCNA_01153	0.21	-2.3
1,256,825	-		CCNA_01153	0.22	+2.7
1,256,832	+		CCNA_01153	0.23	+0.8
1,256,864	+		CCNA_01153	0.26	+0.4
1,256,869	+		CCNA_01153	0.26	+0.1
1,256,872	-		CCNA_01153	0.26	+0.4
1,256,876	-		CCNA_01153	0.26	+0.4
1,256,878	+		CCNA_01153	0.27	-0.1
1,256,937	-		CCNA_01153	0.31	+0.4
1,256,948	-		CCNA_01153	0.32	-0.2
1,257,004	+		CCNA_01153	0.36	-1.0
1,257,044	+		CCNA_01153	0.40	-1.1
1,257,044	+		CCNA_01153	0.40	-0.8
1,257,061	-		CCNA_01153	0.41	+0.4
1,257,090	+		CCNA_01153	0.43	+0.1
1,257,103	+		CCNA_01153	0.44	+2.7
1,257,103	+		CCNA_01153	0.44	-0.5
1,257,103	+		CCNA_01153	0.44	-0.1
1,257,111	-		CCNA_01153	0.45	+1.7
1,257,111	-		CCNA_01153	0.45	+3.7
1,257,128	+		CCNA_01153	0.46	+0.7
1,257,128	+		CCNA_01153	0.46	-1.0
1,257,128	+		CCNA_01153	0.46	-0.2
1,257,128	+		CCNA_01153	0.46	+0.9
1,257,128	+		CCNA_01153	0.46	-0.3
1,257,128	+		CCNA_01153	0.46	+0.4
1,257,128	+		CCNA_01153	0.46	-1.5
1,257,128	+		CCNA_01153	0.46	-0.6
1,257,128	+		CCNA_01153	0.46	-1.7
1,257,128	+		CCNA_01153	0.46	-0.3
1,257,136	-		CCNA_01153	0.47	+2.4
1,257,136	-		CCNA_01153	0.47	-1.0
1,257,136	-		CCNA_01153	0.47	+0.4
1,257,136	-		CCNA_01153	0.47	-0.8
1,257,150	+		CCNA_01153	0.48	+0.2
1,257,158	-		CCNA_01153	0.48	+1.7
1,257,164	+		CCNA_01153	0.49	+0.7
1,257,169	+		CCNA_01153	0.49	+1.5
1,257,169	+		CCNA_01153	0.49	-2.1
1,257,194	+		CCNA_01153	0.51	-0.8
1,257,194	+		CCNA_01153	0.51	-0.7
1,257,194	+		CCNA_01153	0.51	-1.3
1,257,194	+		CCNA_01153	0.51	+0.3
1,257,194	+		CCNA_01153	0.51	-1.5
1,257,209	+		CCNA_01153	0.52	+0.7
1,257,209	+		CCNA_01153	0.52	+0.1
1,257,209	+		CCNA_01153	0.52	-0.6
1,257,217	-		CCNA_01153	0.53	+0.1
1,257,235	+		CCNA_01153	0.54	+2.5
1,257,265	+		CCNA_01153	0.57	-1.3
1,257,265	+		CCNA_01153	0.57	-1.2
1,257,273	-		CCNA_01153	0.57	+1.7
1,257,278	-		CCNA_01153	0.58	-1.6
1,257,291	+		CCNA_01153	0.59	-0.3
1,257,298	-		CCNA_01153	0.59	-1.5
1,257,310	-		CCNA_01153	0.60	-0.1
1,257,322	+		CCNA_01153	0.61	+1.6
1,257,327	+		CCNA_01153	0.62	+0.4
1,257,327	+		CCNA_01153	0.62	+0.2
1,257,327	+		CCNA_01153	0.62	+0.7
1,257,327	+		CCNA_01153	0.62	+0.1
1,257,327	+		CCNA_01153	0.62	-0.1
1,257,327	+		CCNA_01153	0.62	+0.3
1,257,327	+		CCNA_01153	0.62	-0.3
1,257,327	+		CCNA_01153	0.62	+0.3
1,257,327	+		CCNA_01153	0.62	+2.7
1,257,335	-		CCNA_01153	0.62	+2.7
1,257,335	-		CCNA_01153	0.62	+0.1
1,257,335	-		CCNA_01153	0.62	+1.1
1,257,335	-		CCNA_01153	0.62	-1.6
1,257,335	-		CCNA_01153	0.62	-0.6
1,257,335	-		CCNA_01153	0.62	+0.7
1,257,337	+		CCNA_01153	0.62	-0.8
1,257,397	+		CCNA_01153	0.67	+1.7
1,257,397	+		CCNA_01153	0.67	+0.1
1,257,431	-		CCNA_01153	0.70	+2.7
1,257,493	-		CCNA_01153	0.75	+1.7
1,257,532	+		CCNA_01153	0.78	+0.1
1,257,545	-		CCNA_01153	0.79	+1.1
1,257,553	+		CCNA_01153	0.79	-2.1
1,257,604	-		CCNA_01153	0.83	+0.1
1,257,620	+		CCNA_01153	0.85	+0.4
1,257,699	+				-0.9
1,257,725	+				+0.1
1,257,732	+				-0.1
1,257,733	-				+0.9
1,257,737	+				+1.1
1,257,740	-				+0.9
1,257,747	+				-0.7
1,257,755	+				-0.7
1,257,755	-				-0.4
1,257,765	-				+0.7
1,257,781	-				+2.7
1,257,788	-				+0.4
1,257,888	+				+0.2
1,257,993	-		CCNA_01154	0.13	+0.4
1,258,014	-		CCNA_01154	0.16	+0.4
1,258,069	+		CCNA_01154	0.24	-1.6
1,258,082	+		CCNA_01154	0.26	-0.1
1,258,091	-		CCNA_01154	0.27	-0.6
1,258,098	+		CCNA_01154	0.28	+0.0
1,258,126	+		CCNA_01154	0.32	-0.9
1,258,126	+		CCNA_01154	0.32	-0.3
1,258,126	+		CCNA_01154	0.32	+2.7
1,258,134	-		CCNA_01154	0.34	-2.1
1,258,138	+		CCNA_01154	0.34	-0.3
1,258,146	-		CCNA_01154	0.35	+0.7
1,258,146	-		CCNA_01154	0.35	+1.1
1,258,146	-		CCNA_01154	0.35	+0.7
1,258,173	+		CCNA_01154	0.39	+2.4
1,258,182	-		CCNA_01154	0.41	+0.4
1,258,182	-		CCNA_01154	0.41	+1.7
1,258,274	+		CCNA_01154	0.54	-0.5
1,258,309	+		CCNA_01154	0.59	-0.9
1,258,317	-		CCNA_01154	0.60	-1.1
1,258,370	+		CCNA_01154	0.68	-0.0
1,258,370	+		CCNA_01154	0.68	-0.8
1,258,454	+		CCNA_01154	0.80	+0.9
1,258,495	+		CCNA_01154	0.86	-1.4
1,258,544	+				-1.2
1,258,558	+				+0.2
1,258,561	-				+0.0
1,258,564	+				-0.9
1,258,565	-				+1.1
1,258,566	-				+1.1
1,258,586	+				-0.1
1,258,594	-				+0.1
1,258,595	+				-0.5
1,258,610	+				+0.1
1,258,610	+				+0.4
1,258,618	-				-0.7
1,258,623	-				+0.7
1,258,680	+				-0.8
1,258,688	-				-0.7
1,258,715	+				-0.1
1,258,723	-				-0.7
1,258,723	-				+0.3