Strain Fitness in Shewanella loihica PV-4 around Shew_3781

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
4,499,854	+		Shew_3780	0.42	+1.3
4,499,928	-		Shew_3780	0.47	+0.6
4,499,933	+		Shew_3780	0.47	+0.1
4,500,064	+		Shew_3780	0.56	-0.1
4,500,157	+		Shew_3780	0.62	+0.1
4,500,303	+		Shew_3780	0.71	-0.1
4,500,330	-		Shew_3780	0.73	+0.2
4,500,346	-		Shew_3780	0.74	-0.5
4,500,569	-		Shew_3780	0.88	-0.5
4,500,694	-				+0.6
4,500,706	-				-0.3
4,500,867	+		Shew_3781	0.16	-0.3
4,500,895	+		Shew_3781	0.20	-0.5
4,500,895	+		Shew_3781	0.20	-0.4
4,500,895	+		Shew_3781	0.20	-0.2
4,500,895	+		Shew_3781	0.20	+0.2
4,500,895	+		Shew_3781	0.20	-0.7
4,500,895	+		Shew_3781	0.20	-0.2
4,500,903	-		Shew_3781	0.21	-1.7
4,500,903	-		Shew_3781	0.21	+0.0
4,501,069	+		Shew_3781	0.44	-0.6
4,501,069	+		Shew_3781	0.44	-0.2
4,501,077	-		Shew_3781	0.45	-0.0
4,501,077	-		Shew_3781	0.45	-0.7
4,501,077	-		Shew_3781	0.45	-0.6
4,501,275	-		Shew_3781	0.72	-1.0
4,501,415	+				-0.1
4,501,625	+		Shew_3782	0.13	-0.3
4,501,741	-		Shew_3782	0.23	-1.1
4,501,916	+		Shew_3782	0.39	-0.5
4,501,917	+		Shew_3782	0.39	-1.0
4,501,917	+		Shew_3782	0.39	+0.8
4,501,924	-		Shew_3782	0.39	-0.1
4,501,925	-		Shew_3782	0.39	-0.8
4,502,013	+		Shew_3782	0.47	+0.5
4,502,266	+		Shew_3782	0.69	-0.2