Strain Fitness in Shewanella loihica PV-4 around Shew_3698

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
4,401,490	+		Shew_3697	0.29	-3.6
4,401,497	+		Shew_3697	0.30	-3.9
4,401,498	-		Shew_3697	0.30	-4.1
4,401,502	+		Shew_3697	0.30	-3.1
4,401,737	-		Shew_3697	0.50	-4.1
4,401,772	-		Shew_3697	0.53	-2.8
4,401,960	+		Shew_3697	0.69	-3.2
4,402,132	+		Shew_3697	0.84	-2.9
4,402,166	-		Shew_3697	0.87	-2.9
4,402,220	+				-1.5
4,402,225	+				-1.7
4,402,629	+		Shew_3698	0.34	-1.9
4,402,682	+		Shew_3698	0.41	-1.8
4,402,712	-		Shew_3698	0.44	-3.6
4,402,765	+		Shew_3698	0.50	-2.1
4,402,773	-		Shew_3698	0.51	-2.1
4,402,773	-		Shew_3698	0.51	-1.8
4,402,773	-		Shew_3698	0.51	-2.4
4,403,072	+		Shew_3698	0.86	-1.9
4,403,129	+				-1.8
4,403,427	+				-0.1
4,403,493	+				-1.8
4,403,562	-		Shew_3699	0.16	-0.3
4,403,860	-		Shew_3699	0.53	-0.6
4,403,956	+		Shew_3699	0.65	+0.9