Strain Fitness in Shewanella loihica PV-4 around Shew_3693

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
4,397,244	-				-1.9
4,397,338	+				-1.4
4,397,346	-				-1.4
4,397,544	-		Shew_3693	0.25	-1.7
4,397,639	-		Shew_3693	0.35	-3.1
4,397,689	+		Shew_3693	0.39	-2.1
4,397,789	+		Shew_3693	0.49	-0.7
4,397,917	+		Shew_3693	0.62	-1.6
4,397,917	+		Shew_3693	0.62	-2.2
4,397,970	+		Shew_3693	0.67	-1.5
4,398,167	-		Shew_3693	0.86	-2.8
4,398,222	+				-1.3
4,398,664	-		Shew_3694	0.32	-1.9
4,398,850	-		Shew_3694	0.52	-0.4
4,398,869	-		Shew_3694	0.54	-2.1
4,399,023	+		Shew_3694	0.70	-1.4
4,399,066	-		Shew_3694	0.74	-1.6
4,399,165	+		Shew_3694	0.85	-1.3
4,399,178	+		Shew_3694	0.86	-2.7
4,399,208	-		Shew_3694	0.89	-1.8
4,399,210	+		Shew_3694	0.90	-2.1
4,399,210	+		Shew_3694	0.90	-1.1
4,399,210	+		Shew_3694	0.90	-1.8
4,399,218	-				-1.5
4,399,218	-				-2.4
4,399,218	-				-1.7
4,399,223	+				+0.7