Strain Fitness in Shewanella loihica PV-4 around Shew_3690

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
4,393,091	-		Shew_3688	0.59	-1.1
4,393,235	-		Shew_3688	0.74	-0.6
4,393,238	+		Shew_3688	0.74	+0.4
4,393,528	-				-1.0
4,393,774	-		Shew_3689	0.47	+0.2
4,393,837	+		Shew_3689	0.61	-0.5
4,394,133	+		Shew_3690	0.12	+0.0
4,394,338	+		Shew_3690	0.37	-0.2
4,394,381	+		Shew_3690	0.42	-0.6
4,394,766	-		Shew_3690	0.90	-0.1
4,394,776	-				+1.2
4,394,845	+				-0.4
4,394,846	+				-0.2
4,394,853	-				-2.8
4,394,874	+				-1.8
4,394,896	-				-0.0
4,395,021	-				-3.7
4,395,228	-		Shew_3691	0.15	-1.0
4,395,362	+		Shew_3691	0.24	+0.5