Strain Fitness in Shewanella loihica PV-4 around Shew_3577

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
4,274,032	-		Shew_3576	0.14	-0.5
4,274,037	-		Shew_3576	0.14	+0.4
4,274,076	+		Shew_3576	0.20	+0.1
4,274,126	+		Shew_3576	0.28	-0.2
4,274,182	+		Shew_3576	0.36	+0.3
4,274,281	+		Shew_3576	0.51	+0.1
4,274,315	-		Shew_3576	0.56	+0.7
4,274,383	-		Shew_3576	0.66	+1.3
4,274,383	-		Shew_3576	0.66	-0.3
4,274,486	-		Shew_3576	0.81	-0.4
4,274,530	+		Shew_3576	0.87	+0.3
4,274,632	-				+0.9
4,274,834	+				+1.1
4,274,836	+				-0.1
4,274,836	+				+0.1
4,274,844	-				-1.8
4,274,847	-				-0.7
4,275,307	+		Shew_3577	0.83	-0.3
4,275,315	-		Shew_3577	0.85	-0.4
4,275,315	-		Shew_3577	0.85	-0.5
4,275,839	-		Shew_3578	0.86	-0.4
4,275,839	-		Shew_3578	0.86	-0.8
4,275,972	+		Shew_3579	0.14	+1.2
4,275,980	-		Shew_3579	0.16	-0.1
4,276,096	+		Shew_3579	0.37	-0.2
4,276,096	+		Shew_3579	0.37	-0.3
4,276,291	+		Shew_3579	0.72	-0.4
4,276,299	-		Shew_3579	0.74	-0.5
4,276,363	+		Shew_3579	0.85	-1.3
4,276,371	-		Shew_3579	0.87	+1.0