Strain Fitness in Shewanella loihica PV-4 around Shew_3532

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
4,219,096	+		Shew_3531	0.27	+0.1
4,219,129	+		Shew_3531	0.30	-0.1
4,219,162	+		Shew_3531	0.33	+0.2
4,219,550	-		Shew_3531	0.63	-0.9
4,219,555	-		Shew_3531	0.64	-0.5
4,219,666	+		Shew_3531	0.73	-0.2
4,219,666	+		Shew_3531	0.73	-0.1
4,219,674	-		Shew_3531	0.73	-0.7
4,219,727	+		Shew_3531	0.77	-0.4
4,219,727	+		Shew_3531	0.77	+0.5
4,219,727	+		Shew_3531	0.77	-0.0
4,219,940	+				-0.6
4,220,185	+		Shew_3532	0.26	+1.1
4,220,246	-		Shew_3532	0.40	+0.0
4,220,534	-				-0.6
4,221,066	+		Shew_3533	0.53	-0.7
4,221,122	-		Shew_3533	0.60	-1.1
4,221,143	+		Shew_3533	0.63	+0.0
4,221,232	+		Shew_3533	0.74	-0.2
4,221,393	+				-0.2
4,221,427	+				+0.9