Strain Fitness in Shewanella loihica PV-4 around Shew_3487

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
4,172,116	+				-0.2
4,173,284	-	pyrE	Shew_3487	0.49	-1.9
4,173,488	+	pyrE	Shew_3487	0.81	-1.5
4,173,488	+	pyrE	Shew_3487	0.81	-2.4
4,173,496	-	pyrE	Shew_3487	0.82	-1.8
4,173,526	-	pyrE	Shew_3487	0.86	-1.6
4,173,556	+				-3.0
4,173,612	-				-2.3
4,173,750	-				+0.6
4,173,897	+		Shew_3488	0.28	+1.5
4,173,963	-		Shew_3488	0.37	+1.7
4,173,996	+		Shew_3488	0.42	+1.5
4,174,001	+		Shew_3488	0.43	+2.2
4,174,009	-		Shew_3488	0.44	+1.6
4,174,066	-		Shew_3488	0.52	+1.2
4,174,306	-		Shew_3488	0.85	+1.1
4,174,353	-				+1.7
4,174,356	-				+0.4
4,174,358	+				+2.1
4,174,390	-				+1.7
4,174,472	+				+1.6
4,174,530	-				-0.5
4,174,599	+				-0.4