Strain Fitness in Shewanella loihica PV-4 around Shew_3380

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
4,027,007	+		Shew_3378	0.60	+0.6
4,027,051	-		Shew_3378	0.66	+1.7
4,027,645	+		Shew_3379	0.41	-0.5
4,027,653	-		Shew_3379	0.43	+0.4
4,028,036	-				+0.0
4,028,081	+		Shew_3380	0.15	-0.5
4,028,142	-		Shew_3380	0.22	-0.5
4,028,313	+		Shew_3380	0.44	-0.3
4,028,406	+		Shew_3380	0.55	-0.7
4,028,406	+		Shew_3380	0.55	-1.1
4,028,427	-		Shew_3380	0.58	-0.5
4,028,771	-				-0.5
4,028,901	+				+0.4
4,029,036	+		Shew_3381	0.15	-0.3
4,029,044	-		Shew_3381	0.15	+0.6
4,029,044	-		Shew_3381	0.15	+0.1
4,029,242	-		Shew_3381	0.26	-0.2
4,029,656	-		Shew_3381	0.48	-0.9
4,029,735	+		Shew_3381	0.52	-0.2