Strain Fitness in Shewanella loihica PV-4 around Shew_3335

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,977,867	+				-0.5
3,977,952	+				-0.4
3,977,970	-				-0.5
3,978,131	+		Shew_3334	0.28	-0.6
3,978,190	-		Shew_3334	0.35	-0.2
3,978,262	-		Shew_3334	0.43	-0.2
3,978,387	+		Shew_3334	0.58	+0.9
3,978,451	-		Shew_3334	0.66	+0.7
3,978,820	-				-0.2
3,978,925	-				-0.1
3,978,991	-		Shew_3335	0.13	-0.7
3,978,996	-		Shew_3335	0.14	-0.2
3,979,242	+		Shew_3335	0.35	+0.1
3,979,284	-		Shew_3335	0.38	-0.3
3,979,531	-		Shew_3335	0.59	+0.2
3,979,612	+		Shew_3335	0.66	-0.2
3,979,667	-		Shew_3335	0.71	-0.4
3,979,754	+		Shew_3335	0.78	-2.0
3,979,760	+		Shew_3335	0.78	+0.1
3,979,762	-		Shew_3335	0.79	+0.7
3,979,820	-		Shew_3335	0.84	-0.8
3,979,820	-		Shew_3335	0.84	-0.3
3,979,821	-		Shew_3335	0.84	-0.0
3,979,861	-		Shew_3335	0.87	-0.4
3,979,865	+		Shew_3335	0.87	-0.0
3,979,914	+				-0.8
3,979,940	-				-0.5
3,979,940	-				+0.4
3,979,941	-				-4.6
3,980,505	-		Shew_3336	0.17	-0.9