Strain Fitness in Shewanella loihica PV-4 around Shew_3289

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,930,843	+				-0.6
3,931,014	-		Shew_3288	0.23	-0.8
3,931,021	+		Shew_3288	0.24	-1.3
3,931,029	-		Shew_3288	0.26	-1.4
3,931,122	-		Shew_3288	0.38	-1.5
3,931,348	+		Shew_3288	0.69	-1.6
3,931,356	-		Shew_3288	0.70	-1.4
3,931,536	+				-1.4
3,932,112	-		Shew_3289	0.21	-4.0
3,932,114	+		Shew_3289	0.21	-2.2
3,932,713	+		Shew_3289	0.45	-3.8
3,932,713	+		Shew_3289	0.45	-2.9
3,932,713	+		Shew_3289	0.45	-5.2
3,932,875	+		Shew_3289	0.52	-6.0
3,933,433	-		Shew_3289	0.74	-1.7
3,933,820	+		Shew_3289	0.90	-4.6
3,934,097	+				-7.2
3,934,289	+		Shew_3290	0.24	-4.8
3,934,601	+		Shew_3290	0.69	-3.4
3,934,665	-		Shew_3290	0.78	-1.9
3,934,900	-				-1.8
3,934,902	+				-4.7
3,935,030	-				-1.1
3,935,030	-				-1.3