Strain Fitness in Shewanella loihica PV-4 around Shew_3247

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,883,809	+		Shew_3246	0.67	+0.8
3,883,855	+		Shew_3246	0.74	-0.2
3,883,863	-		Shew_3246	0.75	-2.5
3,883,946	-		Shew_3246	0.87	-0.5
3,883,951	-		Shew_3246	0.88	-0.3
3,884,000	-				+0.5
3,884,038	+				-0.3
3,884,046	-				+3.0
3,884,046	-				-0.5
3,884,105	-				+0.8
3,884,542	-				-0.9
3,884,888	+		Shew_3247	0.64	-1.3
3,885,097	-				+0.1
3,885,176	-		Shew_3248	0.18	-2.2
3,885,329	-		Shew_3248	0.43	+0.2
3,885,432	-		Shew_3248	0.60	-0.5
3,885,432	-		Shew_3248	0.60	-0.3
3,885,547	-		Shew_3248	0.79	+0.5
3,885,587	-		Shew_3248	0.85	+0.4
3,885,602	-		Shew_3248	0.88	+0.0
3,885,824	+				+1.0
3,885,832	-				-0.3
3,885,838	+				-0.1
3,885,839	-				-0.3
3,885,846	-				+1.5
3,885,925	-				-0.8