Strain Fitness in Shewanella loihica PV-4 around Shew_3243

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,877,125	+		Shew_3242	0.17	+0.1
3,877,133	-		Shew_3242	0.18	-0.4
3,877,133	-		Shew_3242	0.18	-0.3
3,877,133	-		Shew_3242	0.18	+2.2
3,877,161	+		Shew_3242	0.21	+0.0
3,877,200	-		Shew_3242	0.25	-0.2
3,877,249	+		Shew_3242	0.30	+0.0
3,877,272	+		Shew_3242	0.33	-0.3
3,877,329	+		Shew_3242	0.39	+0.1
3,877,329	+		Shew_3242	0.39	+0.0
3,877,337	-		Shew_3242	0.39	+0.0
3,877,352	-		Shew_3242	0.41	-1.9
3,877,358	-		Shew_3242	0.42	-0.2
3,877,375	+		Shew_3242	0.43	+0.8
3,877,383	-		Shew_3242	0.44	-0.5
3,877,383	-		Shew_3242	0.44	+0.2
3,877,385	-		Shew_3242	0.44	-0.6
3,877,426	-		Shew_3242	0.49	-1.2
3,877,426	-		Shew_3242	0.49	+0.2
3,877,533	-		Shew_3242	0.60	-0.3
3,877,533	-		Shew_3242	0.60	+0.1
3,877,595	+		Shew_3242	0.66	-2.1
3,877,609	-		Shew_3242	0.68	+0.5
3,877,610	-		Shew_3242	0.68	+0.0
3,877,615	-		Shew_3242	0.68	+0.0
3,877,658	-		Shew_3242	0.73	+0.2
3,877,701	-		Shew_3242	0.77	-0.5
3,877,727	+		Shew_3242	0.80	-0.3
3,877,752	+		Shew_3242	0.83	+0.6
3,877,853	+				+1.7
3,877,853	+				-1.6
3,877,887	+				+0.1
3,878,204	+				+0.9
3,878,301	-				+1.5
3,878,317	-				+0.5
3,878,384	-				-0.1
3,878,496	-		Shew_3243	0.13	-0.4
3,878,564	+		Shew_3243	0.15	-0.6
3,878,572	-		Shew_3243	0.15	+0.1
3,878,911	-		Shew_3243	0.26	+0.1
3,879,033	+		Shew_3243	0.30	-0.5
3,879,149	+		Shew_3243	0.34	+0.4
3,879,207	-		Shew_3243	0.36	-0.2
3,879,265	-		Shew_3243	0.38	-0.6
3,879,360	-		Shew_3243	0.41	-0.7
3,879,607	-		Shew_3243	0.49	-0.1
3,879,674	-		Shew_3243	0.51	-0.6
3,879,801	+		Shew_3243	0.55	+1.2
3,879,898	+		Shew_3243	0.59	-1.2
3,880,045	+		Shew_3243	0.63	+0.5
3,880,181	+		Shew_3243	0.68	+0.2
3,880,188	+		Shew_3243	0.68	-0.3
3,880,283	+		Shew_3243	0.71	-0.1
3,880,303	-		Shew_3243	0.72	+0.7
3,880,303	-		Shew_3243	0.72	+0.5
3,880,303	-		Shew_3243	0.72	+0.1
3,880,308	-		Shew_3243	0.72	+0.4
3,880,458	-		Shew_3243	0.77	-0.1
3,880,509	+		Shew_3243	0.78	+0.9
3,880,603	+		Shew_3243	0.81	-0.0
3,880,603	+		Shew_3243	0.81	+0.6
3,880,611	-		Shew_3243	0.82	+0.4
3,880,611	-		Shew_3243	0.82	-0.1
3,880,725	-		Shew_3243	0.85	-0.5
3,880,775	-		Shew_3243	0.87	-0.7
3,880,940	-				-0.2
3,881,119	+				+0.1
3,881,253	+		Shew_3244	0.11	+0.0
3,881,514	+		Shew_3244	0.47	-0.0
3,881,514	+		Shew_3244	0.47	-0.1
3,881,667	-		Shew_3244	0.68	-0.2
3,881,736	-		Shew_3244	0.78	-1.3
3,881,827	+				+0.4
3,881,959	+				-0.1
3,882,017	+		Shew_3245	0.13	-0.4
3,882,054	+		Shew_3245	0.17	-0.5