Strain Fitness in Shewanella loihica PV-4 around Shew_3106

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,685,915	-				-0.5
3,686,106	+				-0.5
3,686,114	-				+0.3
3,686,274	+		Shew_3106	0.30	+0.2
3,686,274	-		Shew_3106	0.30	-1.0
3,686,490	+		Shew_3106	0.62	-0.6
3,686,886	+				-0.1
3,687,116	-		Shew_3107	0.18	-0.5
3,687,179	+		Shew_3107	0.24	-0.2
3,687,190	+		Shew_3107	0.25	+1.2
3,687,357	+		Shew_3107	0.39	-1.3
3,687,533	+		Shew_3107	0.54	-0.1
3,687,577	-		Shew_3107	0.58	-1.2
3,687,651	+		Shew_3107	0.65	+0.8
3,687,723	+		Shew_3107	0.71	-0.7
3,687,741	-		Shew_3107	0.72	+0.1