Strain Fitness in Shewanella loihica PV-4 around Shew_3084

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,662,814	+		Shew_3083	0.57	+0.4
3,662,847	+		Shew_3083	0.59	+0.5
3,663,211	-		Shew_3083	0.84	+0.3
3,663,249	+		Shew_3083	0.87	-1.1
3,663,249	+		Shew_3083	0.87	-0.2
3,663,281	+		Shew_3083	0.89	-2.4
3,663,333	+				-0.3
3,663,523	+				+0.2
3,663,523	+				+0.2
3,663,561	+				+0.2
3,663,571	+				+0.3
3,663,750	-				-0.7
3,663,852	+				-0.1
3,663,860	-				-0.4
3,664,257	+		Shew_3084	0.31	+0.1
3,664,354	+		Shew_3084	0.37	+1.3
3,664,506	-		Shew_3084	0.47	-1.7
3,664,757	-		Shew_3084	0.63	+0.1
3,664,844	+		Shew_3084	0.68	+0.3
3,664,891	-		Shew_3084	0.71	+0.3
3,664,942	+		Shew_3084	0.74	+0.7
3,664,970	-		Shew_3084	0.76	+0.9
3,665,120	-		Shew_3084	0.85	+2.2
3,665,182	+		Shew_3084	0.89	+1.6
3,665,465	-				-0.2
3,665,666	+		Shew_3085	0.32	-1.0
3,665,687	-		Shew_3085	0.36	-0.0
3,665,843	-		Shew_3085	0.67	+0.4
3,665,845	+		Shew_3085	0.67	+0.0
3,665,912	-		Shew_3085	0.80	+0.2
3,665,996	+				+0.3
3,666,011	-				+0.5
3,666,141	-				+0.5
3,666,265	-				+0.9