Strain Fitness in Shewanella loihica PV-4 around Shew_3082

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,659,431	+		Shew_3081	0.88	+0.4
3,659,486	+		Shew_3081	0.90	-0.0
3,659,494	-				+0.2
3,659,820	+				+0.7
3,660,220	+				-0.4
3,660,432	+				+0.1
3,660,557	+		Shew_3082	0.13	-0.8
3,660,588	+		Shew_3082	0.15	-0.1
3,660,793	+		Shew_3082	0.29	-0.4
3,660,886	-		Shew_3082	0.36	-0.3
3,660,994	+		Shew_3082	0.43	+2.3
3,661,002	-		Shew_3082	0.44	-0.6
3,661,002	-		Shew_3082	0.44	-0.3
3,661,002	-		Shew_3082	0.44	-2.4
3,661,050	-		Shew_3082	0.47	-0.2
3,661,223	+		Shew_3082	0.59	-0.1
3,661,427	+		Shew_3082	0.73	+0.3
3,661,533	-		Shew_3082	0.80	-0.8
3,661,562	+		Shew_3082	0.82	-0.7
3,661,709	-				-0.1
3,661,777	-				+0.1
3,661,777	-				-1.2
3,662,001	+				-1.3
3,662,418	-		Shew_3083	0.29	+0.2
3,662,505	-		Shew_3083	0.35	-1.1
3,662,585	-		Shew_3083	0.41	-0.3
3,662,729	-		Shew_3083	0.51	+0.3
3,662,814	+		Shew_3083	0.57	+0.4