Strain Fitness in Shewanella loihica PV-4 around Shew_3040

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,610,572	-		Shew_3039	0.45	-0.2
3,610,782	+		Shew_3039	0.82	-0.2
3,611,202	+				-0.1
3,611,512	+				-0.4
3,611,512	+				+1.0
3,611,512	+				-0.2
3,611,520	-				-0.2
3,611,718	+		Shew_3040	0.16	-0.1
3,611,982	-		Shew_3040	0.31	-0.3
3,611,982	-		Shew_3040	0.31	-0.7
3,612,239	-		Shew_3040	0.46	+0.1
3,612,239	-		Shew_3040	0.46	-0.2
3,612,239	-		Shew_3040	0.46	-1.1
3,612,485	-		Shew_3040	0.60	-0.4
3,612,496	-		Shew_3040	0.61	-0.3
3,612,596	-		Shew_3040	0.67	+0.2
3,612,832	+		Shew_3040	0.81	-0.1
3,612,993	+		Shew_3040	0.90	-2.0
3,613,113	+				+0.4
3,613,328	+		Shew_3041	0.18	+0.0
3,613,501	+		Shew_3041	0.37	-0.1
3,613,565	-		Shew_3041	0.44	-0.6
3,613,821	+		Shew_3041	0.71	-0.3
3,613,829	-		Shew_3041	0.72	+0.0
3,613,873	-		Shew_3041	0.77	-0.3
3,614,031	-				-1.4