Strain Fitness in Shewanella loihica PV-4 around Shew_3014

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,578,488	+		Shew_3013	0.34	+0.1
3,578,498	-		Shew_3013	0.35	+0.2
3,578,698	+		Shew_3013	0.48	+0.5
3,578,738	-		Shew_3013	0.51	-0.3
3,579,521	-				+0.2
3,579,587	-				-0.0
3,579,747	+		Shew_3014	0.24	-0.9
3,579,981	+		Shew_3014	0.45	-0.2
3,580,136	-		Shew_3014	0.59	-1.1
3,580,185	-		Shew_3014	0.64	-0.6
3,580,243	-		Shew_3014	0.69	-0.7
3,580,440	+		Shew_3014	0.87	-0.5
3,580,448	-		Shew_3014	0.87	-0.7
3,580,464	-		Shew_3014	0.89	-0.1
3,580,488	+				-1.2
3,580,724	+		Shew_3015	0.11	+0.2
3,580,732	-		Shew_3015	0.12	+0.2
3,580,795	-		Shew_3015	0.17	-0.8
3,581,060	+		Shew_3015	0.38	+0.2
3,581,060	+		Shew_3015	0.38	+0.3
3,581,068	-		Shew_3015	0.38	-0.0
3,581,171	+		Shew_3015	0.47	-0.9
3,581,253	+		Shew_3015	0.53	+0.1
3,581,261	-		Shew_3015	0.54	+0.4
3,581,261	-		Shew_3015	0.54	+0.2
3,581,298	+		Shew_3015	0.57	+0.1
3,581,357	-		Shew_3015	0.62	+1.2
3,581,424	+		Shew_3015	0.67	-0.2