Strain Fitness in Shewanella loihica PV-4 around Shew_2984

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,539,288	-				+0.8
3,539,614	+		Shew_2983	0.31	-0.2
3,539,744	-		Shew_2983	0.50	+0.4
3,539,939	+		Shew_2983	0.80	-0.1
3,540,511	+		Shew_2984	0.15	-0.0
3,540,641	+		Shew_2984	0.24	-0.3
3,540,691	+		Shew_2984	0.27	+0.1
3,540,872	+		Shew_2984	0.39	+1.5
3,540,887	+		Shew_2984	0.40	-0.3
3,541,106	+		Shew_2984	0.54	+2.5
3,541,165	+		Shew_2984	0.58	+1.5
3,541,173	-		Shew_2984	0.58	-0.0
3,541,173	-		Shew_2984	0.58	-0.6
3,541,246	+		Shew_2984	0.63	-0.6
3,541,254	-		Shew_2984	0.63	+0.6
3,541,254	-		Shew_2984	0.63	+0.5
3,541,454	+		Shew_2984	0.76	+0.9
3,541,476	-		Shew_2984	0.78	-0.2
3,541,738	+				-1.6
3,541,738	+				-0.3
3,541,761	+				+0.3
3,542,234	+				+0.3
3,542,242	-				-0.3
3,542,388	+		Shew_2985	0.14	-0.2
3,542,401	+		Shew_2985	0.15	-0.5
3,542,670	-		Shew_2985	0.33	-0.3