Strain Fitness in Shewanella loihica PV-4 around Shew_2981

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,534,595	+		Shew_2979	0.63	-0.3
3,534,649	-		Shew_2979	0.67	+0.2
3,535,012	+				+0.1
3,535,301	-		Shew_2980	0.31	+0.3
3,535,301	-		Shew_2980	0.31	+0.3
3,535,329	-		Shew_2980	0.45	+0.2
3,535,431	-				-1.1
3,535,481	-				-0.3
3,535,552	-				+0.3
3,535,698	+				-0.6
3,535,985	-		Shew_2981	0.21	-0.5
3,536,144	-		Shew_2981	0.29	-0.3
3,536,246	+		Shew_2981	0.35	+0.1
3,536,519	+		Shew_2981	0.48	-0.6
3,536,527	-		Shew_2981	0.49	-0.1
3,536,575	-		Shew_2981	0.51	-0.0
3,536,575	-		Shew_2981	0.51	+0.4
3,536,591	+		Shew_2981	0.52	-2.9
3,536,647	-		Shew_2981	0.55	-1.1
3,536,660	+		Shew_2981	0.56	+0.5
3,536,762	+		Shew_2981	0.61	-0.6
3,537,245	-		Shew_2981	0.85	-0.1
3,537,284	+		Shew_2981	0.87	-0.3
3,537,284	+		Shew_2981	0.87	+0.1
3,537,292	-		Shew_2981	0.88	-2.6
3,537,335	-				-2.1
3,537,422	+				+0.2
3,537,600	+				-0.1
3,537,608	-				-0.2
3,537,711	+				+0.3
3,537,802	+				+0.3
3,537,956	+		Shew_2982	0.17	+0.1
3,538,296	-		Shew_2982	0.37	-0.2