Strain Fitness in Shewanella loihica PV-4 around Shew_2886

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,423,918	+				+0.2
3,424,063	-				+0.9
3,424,073	-				-0.0
3,424,073	-				-0.1
3,424,160	-				-0.2
3,424,247	+		Shew_2885	0.23	+0.1
3,424,247	+		Shew_2885	0.23	-0.1
3,424,258	+		Shew_2885	0.25	-0.5
3,424,271	-		Shew_2885	0.27	-0.7
3,424,317	-		Shew_2885	0.34	-0.3
3,424,457	-		Shew_2885	0.56	-0.1
3,424,457	-		Shew_2885	0.56	-0.9
3,424,493	-		Shew_2885	0.61	-0.0
3,424,519	+		Shew_2885	0.65	-0.1
3,424,650	+		Shew_2885	0.85	+0.1
3,424,796	-				-0.2
3,424,858	-				-2.1
3,424,997	-		Shew_2886	0.12	-1.9
3,425,193	-		Shew_2886	0.28	-1.6
3,425,193	-		Shew_2886	0.28	-0.3
3,425,329	-		Shew_2886	0.39	-0.3
3,425,452	+		Shew_2886	0.50	-0.6
3,425,533	-		Shew_2886	0.56	-0.9
3,425,808	-		Shew_2886	0.79	-1.6
3,425,810	+		Shew_2886	0.79	-0.9
3,426,094	+				-1.1
3,426,245	+				+0.1
3,426,253	-				+0.3
3,426,495	+		Shew_2887	0.29	+0.6
3,426,516	-		Shew_2887	0.31	+0.6