Strain Fitness in Shewanella loihica PV-4 around Shew_2802

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,319,303	+		Shew_2801	0.71	-0.0
3,319,328	+		Shew_2801	0.72	-0.1
3,319,336	-		Shew_2801	0.72	-0.3
3,319,336	-		Shew_2801	0.72	-0.3
3,319,454	+		Shew_2801	0.76	+0.2
3,319,664	-		Shew_2801	0.83	-0.2
3,319,769	+		Shew_2801	0.86	-0.8
3,319,769	+		Shew_2801	0.86	-0.2
3,319,777	-		Shew_2801	0.86	-1.1
3,320,153	-				-0.6
3,320,327	-				-0.4
3,320,574	+		Shew_2802	0.26	-1.7
3,320,592	-		Shew_2802	0.27	-0.4
3,320,638	-		Shew_2802	0.31	-0.9
3,320,874	-		Shew_2802	0.52	-0.7
3,320,874	-		Shew_2802	0.52	+0.0
3,320,881	+		Shew_2802	0.52	+0.4
3,320,889	-		Shew_2802	0.53	-0.3
3,320,889	-		Shew_2802	0.53	+0.4
3,321,326	-				-0.0
3,321,430	+				-0.2
3,321,430	+				-0.6
3,321,438	-				-0.1
3,321,438	-				+0.4
3,321,613	-		Shew_2803	0.23	-0.6
3,321,636	+		Shew_2803	0.26	+0.6
3,322,055	-		Shew_2803	0.84	+0.4
3,322,208	-				-0.3