Strain Fitness in Shewanella loihica PV-4 around Shew_2795

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,308,335	+				+0.7
3,308,669	-				+0.2
3,309,094	-				+0.1
3,309,186	-				+0.3
3,309,353	-				-0.5
3,309,364	+				-0.9
3,309,385	+				-1.2
3,309,701	+		Shew_2795	0.32	-1.0
3,309,813	+		Shew_2795	0.40	-0.9
3,310,185	+		Shew_2795	0.68	-1.1
3,310,254	-		Shew_2795	0.73	-2.8
3,310,273	+		Shew_2795	0.74	-1.0
3,310,607	-				-1.4
3,310,673	+				-1.5
3,310,681	-				-0.3
3,310,698	+				-1.5
3,311,087	+				+0.3
3,311,363	+				-0.0
3,311,394	-				-0.0
3,311,395	+				+0.2
3,311,512	-		Shew_2797	0.15	-0.2